Gene Information

Name : VPBB_2161 (VPBB_2161)
Accession : YP_007275798.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Unknown
Product : Type I restriction-modification system, DNA-methyltransferase subunit M
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2397878 - 2399284 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGTTGTTCTTAAAGTACATTTCCGATGTACATAGAGATAAAGTAGCCGAACTAACGGTTGAATACGGAGATGAACCAGA
GCTGATCGCTGCAATGATGGAGAGCCAGTCTTTTAAAGTCCCAACAGGCGCAACTTTTTGGGATCTATACGAAGCTCGCC
ATGAAGCAGGTAACGGATCACGTATCGACCAAGCTCTGCACGCTATCGAAGAAGCAAACGGCACCAAGCTAAAGAATGTA
TTTCAAGACATCAGCTTTAACACCGACAAACTTGGTGATGAAAAACAAAAGAACGAAATTCTTCGCCACTTACTGGAAGA
TTTTGGTAAAGAGACGTTAAACCTTCGCCCAAGCCGTGTTGGCTCATTAGATGTGATAGGTAATGCCTACGAGTATCTAA
TCAAACACTTCGCGGCAAGTAGTGGCAAATCGGCTGGCGAGTTCTATACACCACCAGAAGTCTCTGATTTACTCTCTATC
ATCCTTGAACCACAACAAGGCGACAGTATTTGTGACCCAGCCTGTGGCTCAGGCTCACTATTGATGAAGTGTGGTAAGCA
AGTTCAAAAGAACTTTGGCGGTTCGAAGCAGTATGCTTTGTTTGGTCAGGAGGCAATTGGTTCAACTTGGTCACTGGCGA
AGATGAACATGTTCCTGCATGGTGAAGATAACCACCGTATTGAGTGGGGGGACACAATTCGTAACCCTAAGCTACAAGAT
CAGGAAGGTGGATTACTGCACTTTGATGTGGTTACCGCCAACCCTCCATTTTCCTTAGATAAATGGGGATACGACATCGC
GAGCAATGATCACTTTGGTCGTTTCCGCCGTGGTCTTCCACCAAAAACTAAAGGTGACTATGCGTTTATCTCACACATGA
TTGAGACGTTAAAACCACAAACTGGTCGTATGGGTGTCGTTGTACCTCACGGTGTGCTATTCCGAGCATCATCAGAAGGT
AAAATTCGTAAACAACTGATTGAAGAAAACTTGCTAGATGCCGTAATTGGTTTACCTGAGAAGCTGTTCTTTGGTACAGG
CATCCCAGCCGCCATCCTGATCTTCAAAAAGCAGAAAAACGATAACAAGGTATTGTTTATTGATGCCTCTCGTGAATTCA
AATCAGGTAAGAACCAGAACCAACTAACTCCTGAGAACATACAAAAGATTGTAGATACTTATAAGGCGCGTCAAACCACT
GATAAATACTCATACCTAGCTACGCTAGAAGAGATTGCCGAGAACGACTACAACCTCAATATTCCTCGTTACGTCGACAC
GTTTGAGGAAGAAGAAGAGATAGATTTAGTTGCGGTGCGAACTGAACGTTTAGCATTACAGAATGAGTTGGCTGATTTAG
AAGCTGAGATGGCAGGTTACCTAGAGGAGCTAGGTTATGGTGCCTAA

Protein sequence :
MLFLKYISDVHRDKVAELTVEYGDEPELIAAMMESQSFKVPTGATFWDLYEARHEAGNGSRIDQALHAIEEANGTKLKNV
FQDISFNTDKLGDEKQKNEILRHLLEDFGKETLNLRPSRVGSLDVIGNAYEYLIKHFAASSGKSAGEFYTPPEVSDLLSI
ILEPQQGDSICDPACGSGSLLMKCGKQVQKNFGGSKQYALFGQEAIGSTWSLAKMNMFLHGEDNHRIEWGDTIRNPKLQD
QEGGLLHFDVVTANPPFSLDKWGYDIASNDHFGRFRRGLPPKTKGDYAFISHMIETLKPQTGRMGVVVPHGVLFRASSEG
KIRKQLIEENLLDAVIGLPEKLFFGTGIPAAILIFKKQKNDNKVLFIDASREFKSGKNQNQLTPENIQKIVDTYKARQTT
DKYSYLATLEEIAENDYNLNIPRYVDTFEEEEEIDLVAVRTERLALQNELADLEAEMAGYLEELGYGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-78 44
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-78 44
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-78 44
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 1e-77 44
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-78 44
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 3e-78 44
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 6e-79 44
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-78 44
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 3e-78 44
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 1e-78 44
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-78 44
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 3e-79 44
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-78 44
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-78 44
ORF6 BAC22943.1 - Not tested etd PI Protein 1e-78 44
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-78 44
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-78 44
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 1e-78 44
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-78 44
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 9e-79 44
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-79 44
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 6e-79 44