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Name : VPBB_1969 (VPBB_1969) Accession : YP_007275613.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 2196099 - 2198063 bp Length : 1965 bp Strand : - Note : Equivalent to RIMD VP2149 DNA topoisomerase III DNA sequence : ATGTCTCGTCTGTTTATTGCTGAAAAACCCAGTCTAGGTCGTGCTATTGCGGCTGCTTTACCTAATCCCCAAAAGAAAGA CCAAGGCTTTATCCGTTGTGGAAATGGTGATGTGGTGACGTGGTGTATTGGTCATTTGCTAGAGCAAGTTGAGCCAGACG CTTACGATGAACGCTACAAAAAATGGAACATGGCCGATCTGCCGATTGTTCCTCAGCAATGGCAACTTAGACCGAGAAAA AGTGCCAGTAAGCAGTTAACCGTGATTCGTAAATTGCTCAAAGAAGCAACTGAAGTGATTCATGCGGGAGACCCAGACCG TGAAGGGCAGTTGTTAGTTGATGAGGTTCTCGACTACTGCAAGCTTTCCAAAACTAAGAAAGAAGCGACACAGCGTTTGC TGATTTCTGACTTGAACTTACCTGCGGTGAAGCGCGCACTAAACTCAATGCGCAGTAATCGTGATTTTATTCCTCTGTCT GTTTCCGCTCTCGCGCGCTCACGGGCGGATTGGTTGTATGGAATGAATATGTCTCGCGCTTATACCTTGCTGGGACAAAA GGCTGGCTACCAAGGTGTGCTCTCGGTTGGGCGTGTGCAAACTCCGGTTCTAGGGCTTGTCGTCCGTCGAGATGAAGAAA TTGAAAACTTTGTTCCGAAAGATTACTTCACGCTGCACGCATTGATCCCGTATCAAGACCAAAATGGGGCGTTTGATATT CGCGCACGCTGGAAACCCAGTGAGGCTTGCAAACCATGGCAGGATGAAGAAGGGCGAGTATTAAATCGCAAGTTAGTCGA AAACGTCGCTAATCGGATCGCGAACCAGCCAGCGATAGTGAAGGAATCAGAGCAGAAGCAAACCAAGCAATCTGCACCAT TGCCATATTCATTATCTGCTTTGCAGATTGATGCAGCAAAGCGTTATGGCATGAGTGCGCAGCAGGTGCTAGATACTTGT CAGGCACTATACGAAAAGCACAAACTGATCACTTATCCGCGTTCTGATTGTCGCTACTTGCCGTTGGAGCATTATTCTCA AGCTGGAACGGTTACATCCGCTATTGTAAACAACGCCAAAGAACTGCAAAGCGCAGTGAATGGTGCCGATTTATCGATTA AGTCGAAAGCGTGGAATGACAAAAAAGTCGATGCTCACCACGCCATCATTCCAACGCCTAAGCAAGCCAACGTTAATGCG CTGTCTGGCAACGAAATGAGAGTGTATCAGCTCGTTGCGAGCCAATATTTAATGCAGTTTTATCCTGCGGCTGTCTATGC CGAAGCGAAATTGGTATTCGACATCGCTGGTGGCATTTTCATCGCTAAAGGCCGTCAACTTGTTTCGTCGGGGTGGAAAG CACTGATGGGAAAAACGGATAAAGAAGACGAAGGTATTGATGCAGTGCCACCGTTAAGTGAAGGCACGGTGTTAACATGC CGTGAAGGTGAAATTAAAGACCGAAAAACTGAGCCACCAAAACACTTTACTGAAGCCACTCTGCTGCAAGCGATGACGGG AATTGCTCGTTATGTTGCCGATAAAGAGTTGAAAAAAATTCTGCGCGACACAGATGGATTAGGTACGGAAGCGACTCGTG CGGGTATTTTGGATACGCTCTTTAAGCGTCAGTTATTGACAAGGCAAGGTAAATCCATACTCAGCTCGCAAGCTGGACGA GGGTTAATCAACGCATTACCACAAGATGCGACGTATCCTGACATGACCGCTCATTGGGAGCACCAACTTCAGGGGATGGC AGAAAGAAATCAAGCTTATCAACCTTTCATGCAGGCACTTGAACAGCGTATTGATGGGTTGATGAGCCAAGTAAAATCAG GGCCAATACCGGATTCTCTGCGCCACTTACCTAAAGTCGAACGTCCGGCGTTCAAGCGTAAAAAGCGAAGCTACCCAAAG AGTGGGGCATCGAAAGCGGGAGCCTCAAAGCGAAAGAGCTCTTAA Protein sequence : MSRLFIAEKPSLGRAIAAALPNPQKKDQGFIRCGNGDVVTWCIGHLLEQVEPDAYDERYKKWNMADLPIVPQQWQLRPRK SASKQLTVIRKLLKEATEVIHAGDPDREGQLLVDEVLDYCKLSKTKKEATQRLLISDLNLPAVKRALNSMRSNRDFIPLS VSALARSRADWLYGMNMSRAYTLLGQKAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVPKDYFTLHALIPYQDQNGAFDI RARWKPSEACKPWQDEEGRVLNRKLVENVANRIANQPAIVKESEQKQTKQSAPLPYSLSALQIDAAKRYGMSAQQVLDTC QALYEKHKLITYPRSDCRYLPLEHYSQAGTVTSAIVNNAKELQSAVNGADLSIKSKAWNDKKVDAHHAIIPTPKQANVNA LSGNEMRVYQLVASQYLMQFYPAAVYAEAKLVFDIAGGIFIAKGRQLVSSGWKALMGKTDKEDEGIDAVPPLSEGTVLTC REGEIKDRKTEPPKHFTEATLLQAMTGIARYVADKELKKILRDTDGLGTEATRAGILDTLFKRQLLTRQGKSILSSQAGR GLINALPQDATYPDMTAHWEHQLQGMAERNQAYQPFMQALEQRIDGLMSQVKSGPIPDSLRHLPKVERPAFKRKKRSYPK SGASKAGASKRKSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-117 | 43 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-117 | 43 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-117 | 43 |
