Gene Information

Name : VPBB_1832 (VPBB_1832)
Accession : YP_007275478.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Resistance
Product : Macrolide export ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2043940 - 2044689 bp
Length : 750 bp
Strand : -
Note : permease protein MacB; Similar to RIMD VP1995 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAATAACAACAATAACTCTGGAGAGAACATGTCGAACAAGCCGCTTGTTGAGCTGACCAACATCTGTAAATACTACTC
AAGCGGGGAGGCGGAAGTTCGCGCGTTAGACGGCGTTGACTTAACCATCAATCAAGGCGAGTTTCTTTCGATTCTTGGCC
CGTCCGGTTCGGGCAAATCAACGTTGATGAACATGCTCGGCTGTTTAGATAAGCCCACTGATGGCGAGTACCAACTTGGC
GGCCAAAACGTCGCAAGTTTAAGTGCGAATGAGCTGGCTGGCATTCGTAACCAAAAGATTGGATTTGTCTTCCAAAGCTT
TAACTTATTGGAATACGCGACGGCGCTCGATAACGTGGCACTGCCGTTGGTTTACTCTGGCATCAAAGCCAAAGAACGTC
GCCAGCGCGCCGCCAAATTGCTAGAGCAAGTCGGGCTAGGGGATCGTTTAGACCACAAACCAAACCAGCTTTCTGGCGGT
CAAAAACAGAGGGTCGCGATTGCAAGAGCCTTGGTCAACGATCCGCAAATCATCTTAGCGGATGAACCAACGGGTGCATT
GGATTCAAAATCCGGCGCAGAGATTGAAGCCTTGTTCAACCAACTCCACGCCGAAGGCAGAACATTGATCATCGTGACTC
ACGATAACGCTCTGGCAGAGCGCACTAAACGCATCATCACCATCAAAGATGGTAAGGTGATTTCGGATAGAGCGCCGATA
GGGAAGGAGAACGCAATTTCTCACTGCTAA

Protein sequence : 
MNNNNNSGENMSNKPLVELTNICKYYSSGEAEVRALDGVDLTINQGEFLSILGPSGSGKSTLMNMLGCLDKPTDGEYQLG
GQNVASLSANELAGIRNQKIGFVFQSFNLLEYATALDNVALPLVYSGIKAKERRQRAAKLLEQVGLGDRLDHKPNQLSGG
QKQRVAIARALVNDPQIILADEPTGALDSKSGAEIEALFNQLHAEGRTLIIVTHDNALAERTKRIITIKDGKVISDRAPI
GKENAISHC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_1832 YP_007275478.1 Macrolide export ATP-binding protein NC_012469.1.7686878. Protein 1e-60 56
VPBB_1832 YP_007275478.1 Macrolide export ATP-binding protein NC_008702.1.4606598. Protein 8e-51 50
VPBB_1832 YP_007275478.1 Macrolide export ATP-binding protein CP001581.1.gene598.p Protein 2e-41 44
VPBB_1832 YP_007275478.1 Macrolide export ATP-binding protein CP001581.1.gene798.p Protein 7e-37 42
VPBB_1832 YP_007275478.1 Macrolide export ATP-binding protein NC_012469.1.7685735. Protein 3e-33 41