Gene Information

Name : VPBB_1787 (VPBB_1787)
Accession : YP_007275433.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : BarA-associated response regulator UvrY ( GacA SirA)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1991374 - 1991940 bp
Length : 567 bp
Strand : -
Note : Similar to RIMD VP1945 transcriptional regulator, LuxR family

DNA sequence :
ATGAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTGAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAAT
GGACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCG
TACTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCA
GGGCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAAT
GGCATTGAGCCAGTTCTCACCTGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGA
TCACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACAGTCAACAGCTACCGCTATCGA
CTGTTTAGCAAGCTGGACATTAATGGTGACGTTGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGAC
CCTTTAG

Protein sequence :
MNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIVLTVHTENPFPTKVMQAGASGYLTKGA
GPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMITKGQKVTDISEQLNLSPKTVNSYRYR
LFSKLDINGDVELTHLAIRHGMLDTETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-43 48
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-43 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_1787 YP_007275433.1 BarA-associated response regulator UvrY ( GacA SirA) VFG1889 Protein 8e-47 50