Gene Information

Name : VPBB_0171 (VPBB_0171)
Accession : YP_007273869.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 193582 - 193782 bp
Length : 201 bp
Strand : +
Note : -

DNA sequence : 
ATGAGATTTCTACGACTTAAAGACGTGATGTCATTAACAGGGTTAGGCCGCTCCACTATCTATAAGTTCATGGCTGATGA
AACCGATTTTCCGAAGAGTGTCCCACTCGGCGGACGAGCGGTAGCTTGGGTCGAAAGTGAAATAGAGGAATGGATGGAGC
AACGTCTAGCACTGCGAGATAACCAAGAATCTTTTCAGTAA

Protein sequence : 
MRFLRLKDVMSLTGLGRSTIYKFMADETDFPKSVPLGGRAVAWVESEIEEWMEQRLALRDNQESFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 5e-25 96
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 5e-13 61
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 61
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 61
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-13 51
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-13 51
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-13 51
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-07 50
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 4e-09 49
unnamed CAA21398.1 - Not tested HPI Protein 6e-09 49
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-07 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_0171 YP_007273869.1 putative transcriptional regulator VFG1118 Protein 2e-13 61
VPBB_0171 YP_007273869.1 putative transcriptional regulator VFG1141 Protein 6e-14 51