Gene Information

Name : VPBB_1558 (VPBB_1558)
Accession : YP_007275211.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : Type III secretion regulator ExsA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1757131 - 1757991 bp
Length : 861 bp
Strand : -
Note : Equivalent to RIMD VP1699 transcriptional regulator ExsA

DNA sequence : 
ATGGATGTGTCAGGCCAACTAAACACAGAAACGGTCGGCTCTAGCTTGCGAAAAATTCGCAGTTTTTCTCACTACGAAAA
ACATGACGAAGTATTTCACTCAGACCAATCTCATATTGTTGTCGTTCACAATGGTCAATTACGAGTTCAAACTGGCGATT
GCACCATAGATGTCGTTGCCGGGAGTGGGGTATTTCTCTCTCAAGGTGACTACTTGTTAGAGTGCTCACCACAGGGTGGG
AATTATCACTCATCTATCATTGAATTCGACAATGAGCTAGTAAGCCAATTACTGCAAAAACACAGCGATCTTCTCATGAC
GTTGCCAAAAGTGGACAAACTCAACTCGGGTTTGTTTTCTTTTGGTTTGAACATTCTCATTGAGCAAGTGCTTTCCGGCA
TGAAAACGCTGGAGGAGCAGTCGTACCCAGACGCCATTATGCGTTTGAAGTACGAAGAAATGCTGATTCTATTGCTGCAC
AGTCAAGGGGGTGAAGTCCTCTATGCCTTGCTATCGCAGCAAACTAACCGAACCTCAGACCGCTTACGCCGCTTTATGGA
GCAGCACTATTTGAAAGAGTGGAAACTGACGGATTATGCTCAAGAATTTGGTGCCAGTCTCACAACCTTTAAAGAGCTTT
TTAATGAGCACTATGGCATCTCTCCAAGAGCTTGGATCAGTGAGCGTCGCTTATTGCACGCACACAAGCTTTTGCTGACG
AGCAAAATGAGCATTGTCGACGTGGCAATGGAAGCGGGATTTTCCAGCCAATCTTACTTTACTCAAAGTTATCGACGTCG
CTTTGGCACTACGCCAAGTAAGGTCCGTTCCGGTGATGAGCAAGTCGCCATCGCTAATTGA

Protein sequence : 
MDVSGQLNTETVGSSLRKIRSFSHYEKHDEVFHSDQSHIVVVHNGQLRVQTGDCTIDVVAGSGVFLSQGDYLLECSPQGG
NYHSSIIEFDNELVSQLLQKHSDLLMTLPKVDKLNSGLFSFGLNILIEQVLSGMKTLEEQSYPDAIMRLKYEEMLILLLH
SQGGEVLYALLSQQTNRTSDRLRRFMEQHYLKEWKLTDYAQEFGASLTTFKELFNEHYGISPRAWISERRLLHAHKLLLT
SKMSIVDVAMEAGFSSQSYFTQSYRRRFGTTPSKVRSGDEQVAIAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscA AAO18036.1 LscA Virulence TTSS locus Protein 1e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_1558 YP_007275211.1 Type III secretion regulator ExsA VFG0399 Protein 6e-45 44
VPBB_1558 YP_007275211.1 Type III secretion regulator ExsA VFG0208 Protein 1e-51 43