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Name : VPBB_1548 (VPBB_1548) Accession : YP_007275201.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Function : - COG functional category : - COG ID : - EC number : - Position : 1749826 - 1750572 bp Length : 747 bp Strand : - Note : Equivalent to RIMD VP1690 putative type III secretion lipoprotein DNA sequence : ATGATGAAGAATAAAATGCGCGCGCTTTGCCTTGTATTGGCGCTGTTTTTGGTGGGTTGCCAAACCGAGCTTTACACCAA TGTAAGCCAAAAAGAAGGCAACGAAATGCTGTCGATCTTGTTATCGGAAGGCGTGGTGGCGACCAAAGAACCGGACAAAG ACAACAAAGTAAAATTGATGGTCGATAGCTCGCAAATCGCGTTCGCCGTTGATGCATTAAAACGCAAAGGCTACCCACGA GAGCAGTTCTCGACGTTAAAAGAAGTGTTTCCAAAAGACGATTTAATCTCCTCGCCATTGGCGGAAAGAGCGCGTTTGGT TTACGCAAAATCGCAAGAGTTGTCATCAACGCTATCGCAAATTGATGGTGTGCTGGTGGCGCGAGTCCACGTGGTACTCG AAGACCAAGATCTTCGCCCAGGCGAGCGTCCTACTCCTGCTTCGGCATCGGTGTTTATTAAACATGCTGCCGATGTAGCG TTGGACTCTTACGTTCCTCAAATCAAATTGTTGGTGAACAACAGTATTGAAGGGCTGAATTACGACCGCATTAGCGTCGT GATGGTGCCATCTTCGGAGGTGCGAGTGACGACTCAAAGCAACCAATTTAAAAGCATTTTGTCGGTGCAAGTTACCAAAG AAACGGCGAACCATCTCATCGGGATTTTAGTGTTTATGGTACTGCTATTGATTGGCTCGAATGTCGCGACGTTCACGTGG TGCCGCAGGAGCGCAAAGCGTGGTTAA Protein sequence : MMKNKMRALCLVLALFLVGCQTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKGYPR EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRPGERPTPASASVFIKHAADVA LDSYVPQIKLLVNNSIEGLNYDRISVVMVPSSEVRVTTQSNQFKSILSVQVTKETANHLIGILVFMVLLLIGSNVATFTW CRRSAKRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 7e-64 | 60 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 1e-27 | 45 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 2e-27 | 45 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 4e-30 | 44 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 1e-27 | 44 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 1e-27 | 44 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 9e-28 | 43 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 3e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_1548 | YP_007275201.1 | Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) | VFG0218 | Protein | 2e-61 | 68 |
| VPBB_1548 | YP_007275201.1 | Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) | VFG0409 | Protein | 4e-64 | 61 |
| VPBB_1548 | YP_007275201.1 | Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) | VFG0051 | Protein | 6e-35 | 43 |
