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Name : VPBB_1546 (VPBB_1546) Accession : YP_007275199.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Type III secretion cytoplasmic protein (YscL) Function : - COG functional category : - COG ID : - EC number : - Position : 1748551 - 1749189 bp Length : 639 bp Strand : - Note : Equivalent to RIMD VP1688 putative type III secretion protein DNA sequence : ATGGTTTCATTTGTTGAAATAAAAACCGACAACTTGCAGTTAGCGCCAGGTTTAAAGGTGCTCAAAGCCAAGGATTACGT TAGTTATCTCGATTCGCAGCATTTGGTTGAAGCGGCGAATTCGAAAGCCGACAGCATCATTGCTAAAGCGCAGCAAGCGT ATGAGACCGAAAAGCAGCGCGGCTATCAAGATGGTTTGGAGCAGGCGAAAATAGAAAATGCGCAGGCGATGGTCGCTACT TTGGCTCGCTGCAATGAATATTACCTGCAAGTTGAGCACAAAATGACGAACGTCGTTTTAGACGCGGTGCGTAAAATCAT CGATACATTTGATGACGTTGACACCACGATCAGCGTGGTCAGAGAAGCGCTGCAATTGGTGAGTAATCAAAAGCAAGTGA TCTTACACGTTCATCCTGAGCAAGTGGTTGACATGAGAGAGAAAGTTGCTGGCGTTTTGAGTGATTTTCCTGAAGTGGGT TATGTCGATGTGGTTGCCGATGCGCGCCTCAAAAACGGTGGCTGCATACTGGAAACCGAAGTCGGCATTATTGACGCCAG TATCGATGGACAGATTCAGGCGTTAAAGCAAGCGATGGTGAAACAACTCAGTGAGCGGAAAATGACGTCACCAGAGTAG Protein sequence : MVSFVEIKTDNLQLAPGLKVLKAKDYVSYLDSQHLVEAANSKADSIIAKAQQAYETEKQRGYQDGLEQAKIENAQAMVAT LARCNEYYLQVEHKMTNVVLDAVRKIIDTFDDVDTTISVVREALQLVSNQKQVILHVHPEQVVDMREKVAGVLSDFPEVG YVDVVADARLKNGGCILETEVGIIDASIDGQIQALKQAMVKQLSERKMTSPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18079.1 | LscL | Not tested | TTSS locus | Protein | 9e-45 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_1546 | YP_007275199.1 | Type III secretion cytoplasmic protein (YscL) | VFG0220 | Protein | 2e-48 | 52 |
| VPBB_1546 | YP_007275199.1 | Type III secretion cytoplasmic protein (YscL) | VFG0411 | Protein | 2e-45 | 52 |
