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Name : VPBB_1535 (VPBB_1535) Accession : YP_007275188.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) Function : - COG functional category : - COG ID : - EC number : - Position : 1737969 - 1739024 bp Length : 1056 bp Strand : + Note : Equivalent to RIMD VP1675 translocation protein in type III secretion DNA sequence : ATGAGTGGTGAAAAAACCGAACAACCCACCGCCAAAAAGCTCCGCGACGCCCGCAAAAAAGGACAAGTCGCGAAGAGCCA AGAGATCGTCTCTTCGGCGTTAATTCTGGCACTCATCGCCGTGCTGTTTGCCTTTGCCGATTACTACATGTCGCACATCT CTGCCCTACTTTTGCTGCCAAGCGAGCTCGCATATCAAGGCTTTCAAGACGCATTGATCGATGTTGCCATCGCTATCGCC AAAGAGATGGCCTACCTCCTCGCGCCAATTATTTTGGTCGCCGCGCTTATCGCGATTTTTTCTAACATGGGACAGTTTGG TTTTCTTTTTAGTGGCGAGTCCATCAAGCCCGACATTAAGAAAATCAACCCTGTCGAGGGCGCAAAGCGCATCTTCTCGC TAAAAAGCGTCATTGAGTTCATCAAGTCGATACTCAAGGTATCTCTGCTTTCCTGCATCATTTGGGTTACGTTGCGGGGC AACATCAACACCTTAATGCAAATTCCAACTTGTGGATTGGAATGTGTCCCTGCGGTGACGGGAGTTATGATTAAACAATT GATGATCATTTCATCGGTTGGTTTTGTTGTGATAGCTGCGGCTGATTTTGCCTACCAAAAGTTTGACCACACGAAGAAGC TCAAAATGAGCAAGGACGAAGTGAAACGTGAATACAAAGAGATGGAAGGCAGCCCGGAAATCAAAAGTAAACGCCGTCAG CTTCATCAAAAACTTCAAGCTTCTAATCAACGCGAAAACGTTAAGCGCTCCAACGTATTAGTAACGAACCCAACTCACAT CGCGGTTGGTCTGTACTACAAAAAAGGCGAAACACCGTTGCCTGTCATCACTCTGATGGAAACCGATGCGATGGCTAAAC ACATGATTGCAATTGCACGAGAAGAAGGCGTGCCAGTAATGCAAAAAGTGCCATTAGCGCGTGCGCTTTATGCCGACGGA AACGTTGACCAATATATCCCAAGCGAGTTAATTGAAGCCACGGCAGAAGTGCTCCGTTGGCTGGCGTCATTGGAATCTGA TGGTACTCAAAGATAG Protein sequence : MSGEKTEQPTAKKLRDARKKGQVAKSQEIVSSALILALIAVLFAFADYYMSHISALLLLPSELAYQGFQDALIDVAIAIA KEMAYLLAPIILVAALIAIFSNMGQFGFLFSGESIKPDIKKINPVEGAKRIFSLKSVIEFIKSILKVSLLSCIIWVTLRG NINTLMQIPTCGLECVPAVTGVMIKQLMIISSVGFVVIAAADFAYQKFDHTKKLKMSKDEVKREYKEMEGSPEIKSKRRQ LHQKLQASNQRENVKRSNVLVTNPTHIAVGLYYKKGETPLPVITLMETDAMAKHMIAIAREEGVPVMQKVPLARALYADG NVDQYIPSELIEATAEVLRWLASLESDGTQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 4e-97 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_1535 | YP_007275188.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) | VFG0185 | Protein | 6e-87 | 62 |
| VPBB_1535 | YP_007275188.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) | VFG0397 | Protein | 2e-89 | 62 |
| VPBB_1535 | YP_007275188.1 | Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, flagellar export protein-like protein) | VFG0041 | Protein | 1e-58 | 44 |
