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Name : VPBB_1534 (VPBB_1534) Accession : YP_007275187.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1 flagellar export protein-like protein) Function : - COG functional category : - COG ID : - EC number : - Position : 1737168 - 1737953 bp Length : 786 bp Strand : + Note : Equivalent to RIMD VP1674 translocation protein in type III secretion DNA sequence : ATGAGTTACGACGATTTACACCAAGCTTTGTTTCTTTATAGCTTAACGCTGCCTAGGCTCATGGCATGCTTTATCTTTCT GCCTATTTTGAGTAAACAGATGCTTGGCGGCGCAATGATCCGTAACGGCGTACTTTGCTCACTTGCGTTGTTTATTTTTC CCGTCGTAAACGAGCAAGCATTGCCCGCCGAAACTGACGGCCTTTGGTTGATTGTGATTCTAGGTAAAGAAGTTTTGCTG GGTATGCTGATTGGCTTTGTCGCTGCCATTCCTTTTTGGGCGATTGAAGCCACTGGCTTTTTGGTGGATAACCAACGCGG CGCGGCGATGGCAAGCATGTTCAACCCAACGCTGGGTTCTCAATCCACCCCAACGGCGGTATTACTCACCCAAACGTTGA TCACCTTGTTCTTCTCGGGCGGTGGCTTTGTTGCATTTATCTACGCTCTGTTTAAAAGCTACACCACTTGGCCAATACTC GGCTTTTTTCCGATGGTCACGGACGCGTGGGTAAGCTTTTTCTATGATCAGTTTCAACAGTTAATGTGGCTTGGTGTCTT AATGTCGGCGCCACTTGTGCTCGCGATGTTCTTAGCCGAATTTGGCCTTGCGCTGATCAGCCGCTTTGCGCCGCAACTCA ACGTTTTCTTCTTGGCGATGCCCATCAAAAGTGCCATCGCGAGTGTGTTATTGATCGTCTATCTCGGATTAATGATGGAT CACTTTGAAGCACTATTTTATGGCATCACTCGCTTTGGCGATCAGCTCAACACGATTTGGAAATAA Protein sequence : MSYDDLHQALFLYSLTLPRLMACFIFLPILSKQMLGGAMIRNGVLCSLALFIFPVVNEQALPAETDGLWLIVILGKEVLL GMLIGFVAAIPFWAIEATGFLVDNQRGAAMASMFNPTLGSQSTPTAVLLTQTLITLFFSGGGFVAFIYALFKSYTTWPIL GFFPMVTDAWVSFFYDQFQQLMWLGVLMSAPLVLAMFLAEFGLALISRFAPQLNVFFLAMPIKSAIASVLLIVYLGLMMD HFEALFYGITRFGDQLNTIWK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscT | AAO18038.1 | LscT | Virulence | TTSS locus | Protein | 9e-66 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_1534 | YP_007275187.1 | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1 flagellar export protein-like protein) | VFG0396 | Protein | 2e-68 | 63 |
| VPBB_1534 | YP_007275187.1 | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1 flagellar export protein-like protein) | VFG0186 | Protein | 8e-60 | 62 |
