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Name : VPBB_1517 (VPBB_1517) Accession : YP_007275170.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Type III secretion host injection protein (YopB) Function : - COG functional category : - COG ID : - EC number : - Position : 1723322 - 1724521 bp Length : 1200 bp Strand : - Note : Equivalent to RIMD VP1657 putative translocator protein PopB DNA sequence : ATGAGTTCTATTGCACTTGACCGCACTCAGACGCAGGTTTACATCCCTGAGTCTGGCCAAACTACGTTAGAGAACGTACA GAAAACGGCGTCTACTGCGACGCCTTCTGTAACGGTTGAAAACGTAAAGAGTAGAGATGCTGACACTCTGAACACAGGAA GAGTGAAAGTTCAGCTAGATGCCCCAAATGCAGCCGTGAGCGATAAAGTGACAGACTTGACGCTAAAAGCCATGGCTCAA CTGCAAAAGATCGTCGATACCATCGCAAAAGCGCTACACGCTGTTGCTGATCAGACGGGTTCGATCGCAGTTAAAATCAT CGCAGGTTCTGCGGACGATTTTGAAGTGGAGCTTGCGGCGATTACAGACAAACTGAAAAGTGCTCAGAACGAGCTGAAAA TTCAGGAAGTGAAAGTCGCAAAAGCCAAACATGAACAAGAAATGGCAGAGAACCAAGAGAAAATCAAGGAATCAGAAGCC GCCGCAAAAGAGGCTCAGAAATCTGGCTTAGCGGCGAAGATCTTTGGTTGGATCAGCGCGGTTGTCTCTATTGTGGTAGG TGCCATCATGGTTGCCACTGGCGTTGGCGCGGCAGCTGGCGCGCTTATGATCGCTGGTGGCGTCATGGGTGCAGTCAGCA TGGCGCTGCAAGAACCAGCTGTTCAAGACGCGCTAAAAGAAGCGGGTGTGAATGTCGATGTGTTGAACAAAGTGGTGATG GCATTAGAAATTGCTGTCGCTGTCATCGGTGCAATCGTGACCTTTGGTGGCACGGCGGCTGGTGGTATCGCGAAACTTGC CGCAAAAAGTGCCAGCAAAATTGCGCAGAAAGTGACAGATATTGCCACTAAAGCTGCAGCCAATATGGCAAAAGTTGCGG ACATGGGTTCTAAAGCTGCGACAACCACAGCCAAAGCGATTCGCTACGGTGCTGAAACGGTCGACCTTACGGTTAACATA GGTAAGGGCGCAACGGACAGCGTTCACGCTGCTAACAATGCGAATGTTACGGAAATACAAGCCGATATCACGGATCTCCG CGCCAAAATGACGTTGAGTCAGGCAGTCATCGACAAGCTAAAAGAAGAAATTGGCAAGTTGATGGAAGATTTCCAAGAGC TGATGAGCATCATCATGCAAATGATTCAGGCGAAAAGTGAAACCATGCAAACGGTGCTAAGCCGTCCTGCAACGGTTTAA Protein sequence : MSSIALDRTQTQVYIPESGQTTLENVQKTASTATPSVTVENVKSRDADTLNTGRVKVQLDAPNAAVSDKVTDLTLKAMAQ LQKIVDTIAKALHAVADQTGSIAVKIIAGSADDFEVELAAITDKLKSAQNELKIQEVKVAKAKHEQEMAENQEKIKESEA AAKEAQKSGLAAKIFGWISAVVSIVVGAIMVATGVGAAAGALMIAGGVMGAVSMALQEPAVQDALKEAGVNVDVLNKVVM ALEIAVAVIGAIVTFGGTAAGGIAKLAAKSASKIAQKVTDIATKAAANMAKVADMGSKAATTTAKAIRYGAETVDLTVNI GKGATDSVHAANNANVTEIQADITDLRAKMTLSQAVIDKLKEEIGKLMEDFQELMSIIMQMIQAKSETMQTVLSRPATV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopB | AAO18055.1 | LopB | Virulence | TTSS locus | Protein | 7e-18 | 41 |
