|
Name : VPBB_0140 (VPBB_0140) Accession : YP_007273840.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Transcription accessory protein (S1 RNA-binding domain) Function : - COG functional category : - COG ID : - EC number : - Position : 158679 - 161000 bp Length : 2322 bp Strand : - Note : Equivalent to RIMD VP0150 conserved hypothetical protein DNA sequence : ATGAGCCAAGCTATCTGTCGCATGATTGCTCAAGAACTGAATGTTCGCCCAGAGCAAGTCAACGCCGCTGTCACCCTGAT TGATGATGGTAACACGGTCCCATTTATTGCACGTTACCGTAAAGAGGTGACAGGTGGCCTTGATGATACCCAACTGCGTA CTCTGGACAGCCGTCTGTCATACCTTCGCGAGCTCGACGATCGCCGTCAAACCATTCTGAAGTCGATCCAAGAACAAGGC AAACTGACGCCAGAACTAGAACGAGAGATCACGCAAGCCGACAGCAAGACTCGCCTGGAAGACCTTTACCTGCCATACAA ACCAAAGCGCCGCACCAAAGGCCAAATCGCGATTGAAGCTGGCTTAGAACCTCTCGCGGATACACTTTGGAACCAGCCAC AAACAGAACCAGAAAGCGAAGCGACGAAATATCTTGATGCGGACAAAGGCATCGCGGATACCAAAGCGGCACTGGATGGC GCTCGCGCAATCATCATGGAGCGCATTGCTGAGGATGCGAACCTGCTTGAAAAAATTCGTGCTCATCTAAACCGCAACGC GGAACTGGTTTCTCGTGTCGTTGAAGGTAAAGAGCAAGAAGGCGAGAAGTTTAAAGATTACTTCAACCATAACGAGCCAC TGAGCAAAGTGCCATCACACCGTGCACTGGCGATGTTACGAGGCCGTAATGAAGGCTTTTTGACGTTGGCGATGAACGCC GACCCTGAACAAGAAGAAGGTGCACGCCAATCGTACTGTGAAACCATCATTGCCGACCATTATGGCGTGACGCTAAGCAG CGCACCGGCGGACGCATGGCGTAAACAAGTGATCAGTTGGGCATGGCGCATCAAAGTATCGATGCACATGGAAACCGAGC TGATGGGCGCAATGAAAGAACGCGCTGAAATCGAAGCGATTGAAGTGTTTGCCACCAACCTAAAAGATTTGTTGATGGCA GCACCGGCAGGCCCTCGTGCGACGCTGGGTCTCGACCCGGGTCTGCGTACAGGCTCTAAAATAGCTATTGTCGATCCTAC TGGTAAAGTGCTTGCAACAGAAACCATCTACCCTCACCCACCACAAAAGCAATACGACAAATCAGCCCAAATCGTTGATC AGTTGGTGCGCAAATACAATGTGGATTTGATTGCGATTGGTAACGGCACGGCTTCGCGTGAAACCGACAGCTTTGTCGCA GACGTGATCAAACGCGGCAACCTGAAAGTTCAGAAGATCATCGTAAGTGAAGCGGGGGCATCGGTTTACTCAGCATCTGA GCTTGCAGCGAAAGAGTTCCCAAATATGGACGTATCTCTGCGTGGTGCGGTGTCGATTGCTCGTCGTCTGCAAGACCCGC TAGCGGAGCTCGTTAAAATCGATCCTAAATCGATCGGTGTGGGCCAATATCAGCACGATGTTAGCCAATCTATGCTGGCA AAACGTCTTGATGCGATTGTCGAAGACTGTGTAAACGCGGTGGGTGTTGATGTGAACACTGCCTCTGCAGCGCTACTGAC GCGCGTTGCAGGCTTGTCGAGCACCATCGCACAGAACATTGTCGACTTCCGTGATGAAAATGGTCGTTTCGAAGCACGTA CAACTTTGAAGAAAGTGCCTCGTTTAGGTCCTAAAGCGTTCGAGCAGTGTGCGGGTTTCCTTCGTATTATGGATGGTAAA AACCCACTGGATGCCTCTGCAGTGCACCCGGAAGCCTACCCTGTAGTCAAAGCGATTGCCGAGAAGAACAGTAAAGACAT CAAAGCACTGATTGGCGATTCGACGTTCCTTAAAGGTCTGCACGCGGTGGATTACACCGATGAGCACTTCGGTGTCCCAA CGGTGACCGATATCATCAAAGAGCTGGACAAACCAGGCCGAGACCCTCGTCCGGAGTTCAAAACCGCAACCTTCGCTGAA GGCGTTAACTCGGTTGCAGATCTAGAACCGGGCATGATTCTCGAAGGCGTCGTATCGAACGTGGCCAACTTTGGTGCTTT CGTCGATATTGGTGTTCACCAAGATGGTTTAGTACATATCTCAGCCCTGACGGATCGTTTCGTTTCTGATCCGCGTGAAG TGGTGAAAGCAGGCGACATCGTTAAAGTGAAAGTGATGGAAGTGGACGTACAGCGCAAGCGTATCGGTCTATCGATGCGT TTAAACGACGAGCCGGGTCAAGACAACCGCAGCCAACGCTCATCAGCAGCGCCGCGTCGTAATGACCAACCACAACGTCG TCAACCTCGCCGTGATGATTCCTCATCGAACAGCGCAATGGGTGGCGCATTTGCGGCTGCTTTCGCCAAAGCAAAGAAGT AG Protein sequence : MSQAICRMIAQELNVRPEQVNAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRTLDSRLSYLRELDDRRQTILKSIQEQG KLTPELEREITQADSKTRLEDLYLPYKPKRRTKGQIAIEAGLEPLADTLWNQPQTEPESEATKYLDADKGIADTKAALDG ARAIIMERIAEDANLLEKIRAHLNRNAELVSRVVEGKEQEGEKFKDYFNHNEPLSKVPSHRALAMLRGRNEGFLTLAMNA DPEQEEGARQSYCETIIADHYGVTLSSAPADAWRKQVISWAWRIKVSMHMETELMGAMKERAEIEAIEVFATNLKDLLMA APAGPRATLGLDPGLRTGSKIAIVDPTGKVLATETIYPHPPQKQYDKSAQIVDQLVRKYNVDLIAIGNGTASRETDSFVA DVIKRGNLKVQKIIVSEAGASVYSASELAAKEFPNMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSMLA KRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSSTIAQNIVDFRDENGRFEARTTLKKVPRLGPKAFEQCAGFLRIMDGK NPLDASAVHPEAYPVVKAIAEKNSKDIKALIGDSTFLKGLHAVDYTDEHFGVPTVTDIIKELDKPGRDPRPEFKTATFAE GVNSVADLEPGMILEGVVSNVANFGAFVDIGVHQDGLVHISALTDRFVSDPREVVKAGDIVKVKVMEVDVQRKRIGLSMR LNDEPGQDNRSQRSSAAPRRNDQPQRRQPRRDDSSSNSAMGGAFAAAFAKAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
