Gene Information

Name : VPBB_0130 (VPBB_0130)
Accession : YP_007273830.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : General secretion pathway protein K
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 150310 - 151320 bp
Length : 1011 bp
Strand : +
Note : Equivalent to RIMD VP0140 general secretion pathway protein K

DNA sequence : 
ATGGCTAATCGTCAGCGCGGTGTTGCTTTGATTATTGTACTGATGCTGTTGGCGATTATGGCGACCATTGCTGCCACCAT
GTCTGAACGTCTGTTTTTGCAGTTTCAGCGCGGTTCAAACCAAATCCATTACCAGCAAGCATATTGGTACAGTGTTGGTG
TTGAAGCCTTGGCTGAAGTGGGTATCGAGCAGAGCTACAAAGACAGCGATACCATCAACCTCAGTCAACCTTGGGCGATT
AAAGAACAAGTGTACCCATTGGACTATGGTCAAGCTGCAGGACGTATTTGGGATAAGCAAGCGTGCTTTAACCTCAATGT
GTTAAGTCGAGTGCAGCCGACCGGACAACAAACCACTCGACCATATTTGGTTCAAGTGCTGCAGCGTTTGTTGGAAGAGT
CAGATGTAGAGCCGTATCAAGCGGAAGTGATTGCCGATTCCACTTGGGAATACATTGATTCAGACAGCACAGTACGTTCA
ACCACCGGCGTGGAAGACAGCACCTACGAATCGATGAAACCTTCGTATTTAGCGGCTAATGGTTGGATGGCAGACAAAAC
TGAATTGCGCGCGGTATATCAAGTGAGTGGTGAAATTTATCAAAAGATTGAGCCCTTGGTATGTGCGATCCCAAGTGATG
ATTGGCGTTTAAACGTCAACACGGTAGAGGTGGAACAAGCGCCGATTTTAGTCGCTATGTTTTCACCGAACTTGAGCAGC
AGCGACGCGGTTCAACTGATAGAAAAGCGTCCCTTCGATGGTTGGGACAGCGTAGACGAATTTCTAGCGGAGTCAGAATT
AACTGGCTTGAGCGATGATGTAAAGAAAAACGCCAAAGGCTATTTAGGAGTGGATAGCTCCTTCTTCGAATTGGATGCAC
AAGTGTTAGTGGATGATTCACGAGTACGTATCCGAAGCCTTTTGCAAAGTACAAATAGAGAAACGGTGACGGTCGTTCGC
CGTCGTTTTGGAGGGATCAGTGAGCGAGTTTCTGACCGTTCGGCTGAGTAG

Protein sequence : 
MANRQRGVALIIVLMLLAIMATIAATMSERLFLQFQRGSNQIHYQQAYWYSVGVEALAEVGIEQSYKDSDTINLSQPWAI
KEQVYPLDYGQAAGRIWDKQACFNLNVLSRVQPTGQQTTRPYLVQVLQRLLEESDVEPYQAEVIADSTWEYIDSDSTVRS
TTGVEDSTYESMKPSYLAANGWMADKTELRAVYQVSGEIYQKIEPLVCAIPSDDWRLNVNTVEVEQAPILVAMFSPNLSS
SDAVQLIEKRPFDGWDSVDEFLAESELTGLSDDVKKNAKGYLGVDSSFFELDAQVLVDDSRVRIRSLLQSTNRETVTVVR
RRFGGISERVSDRSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspK YP_854400.1 type II secretion protein GspK Not tested PAI I APEC-O1 Protein 5e-44 42
gspK CAE85227.1 GspK, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_0130 YP_007273830.1 General secretion pathway protein K VFG2054 Protein 4e-43 41