Gene Information

Name : VPBB_0128 (VPBB_0128)
Accession : YP_007273828.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : General secretion pathway protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 149258 - 149647 bp
Length : 390 bp
Strand : +
Note : Similar to RIMD VP0138 general secretion pathway protein I

DNA sequence :
ATGCGCAATTTTAAGCAAACTCAACCAAACTTAAACCGTCGCCGAGTGCGAGGGATGACGTTGCTTGAAGTGTTGGTTGC
ACTGGCTATTTTTGCCACCGCGGCGATCAGTGTGATTCGCTCTGTGAGTCAACACATCAACACAGTCAGCTACTTAGAAG
AAAAGATGTTTGCAGCAATGGTTGTGGATAACCAAATGGCGAATGTGATGCTAGATACTGGCGCGCTGAAAGCCAAGAAT
GGTACCGAAGAACTAGCAGGGCGTACATGGTATTGGAAAGTCACGCCTGTAGCCACCACGCAGCCATTGCTGAAAGCATT
TGATGTAAGTGTCGCGACCGCGAAAAACGCGAGTCCAGTTGTTACGGTAAGAAGCTATGTGGCGCAGTAA

Protein sequence :
MRNFKQTQPNLNRRRVRGMTLLEVLVALAIFATAAISVIRSVSQHINTVSYLEEKMFAAMVVDNQMANVMLDTGALKAKN
GTEELAGRTWYWKVTPVATTQPLLKAFDVSVATAKNASPVVTVRSYVAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 5e-08 42
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_0128 YP_007273828.1 General secretion pathway protein I VFG2052 Protein 1e-09 42