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Name : VPBB_0125 (VPBB_0125) Accession : YP_007273825.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : General secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 146922 - 148139 bp Length : 1218 bp Strand : + Note : Equivalent to RIMD VP0135 general secretion pathway protein F DNA sequence : ATGGCAGCATTTGAATACAAAGCGCTGGATGCAAAAGGCAAACAAAAAAAAGGCACGATTGAAGGGGATAACGCTCGTCA AGTGCGCCAACGACTGAAAGAACAAGGAATGATCCCTGTTGAGGTCGTGGAAGCCAAAGCAAAGGCGGCTAAGTCTTCAG GCTCAGTGGGCTTCAAACGTGGTATCAAAACGGCTGAACTGGCTCTGATCACGCGTCAATTATCCACACTTGTTCAATCA GGTATGCCTCTTGAAGAGTGTCTTCGAGCAGTTTCTGAACAAGCAGAAAAGCCACGAATTCGCACCATGATCGCTGCAGT TCGCTCCAAAGTCACCGAAGGTTACCCATTGGCAGATAGCCTAGGTGATTATCCACACGTCTTTGACGAACTGTTTCGCT CTATGGTCGCCGCGGGTGAAAAATCTGGACACCTTGATACGGTTTTAGAGCGCTTGGCGGAGTACGTCGAAAACCGTCAG AAAATGCGTTCTAAGCTGTTGCAAGCGATGATCTACCCTGTCGTATTAGTGGTGTTTGCGGTGGCGATTGTCTCGTTCTT GTTGGCGACCGTGGTACCCAAAATCATCGAGCCGATCATTCAAATGGGGCAAGAGTTGCCACAGTCAACGCAATTTCTGC TGGCGGCTAGTGAGTTCGTCCAAGAGTGGGGGCTGATTATCTTTGCCGTGCTATTAGTTTGTTTTTATGGCTTAAAACTG GCATTGCAAAAACCAGATTTTCGCTTGTCTTGGGACAGAAAAATCATCAGCTTGCCGCTCGTCGGTAAGATTTCTAAAGG CCTCAATACCGCTCGCTTCGCTCGTACCTTGTCGATCTGTACTTCAAGTGCGATCCCAATTCTTGAAGGGATGCGAGTGG CGGTTGATGTGATGTCGAACCGTTACGTAAAGCAGCAAGTGTTGATTGCTGCAGACAACGTCCGTGAAGGGGCAAGCTTG CGTAAAGCTCTGGATCAAACCCGTCTATTCCCACCGATGATGCTGCATATGATCGCCAGTGGTGAGCAGAGTGGTGAGTT AGAAAGCATGCTGACGCGTGCGGCGGACAACCAAGACCAAAACTTTGAATCTACGGTCAATATTGCGTTGGGAGTGTTCA CTCCTGCCTTGATCGCATTGATGGCTGGATTGGTGTTATTCATTGTCATGGCGACCTTGATGCCGATGCTAGAAATGAAT AACTTGATGAGCGGATAA Protein sequence : MAAFEYKALDAKGKQKKGTIEGDNARQVRQRLKEQGMIPVEVVEAKAKAAKSSGSVGFKRGIKTAELALITRQLSTLVQS GMPLEECLRAVSEQAEKPRIRTMIAAVRSKVTEGYPLADSLGDYPHVFDELFRSMVAAGEKSGHLDTVLERLAEYVENRQ KMRSKLLQAMIYPVVLVVFAVAIVSFLLATVVPKIIEPIIQMGQELPQSTQFLLAASEFVQEWGLIIFAVLLVCFYGLKL ALQKPDFRLSWDRKIISLPLVGKISKGLNTARFARTLSICTSSAIPILEGMRVAVDVMSNRYVKQQVLIAADNVREGASL RKALDQTRLFPPMMLHMIASGEQSGELESMLTRAADNQDQNFESTVNIALGVFTPALIALMAGLVLFIVMATLMPMLEMN NLMSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-94 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-93 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_0125 | YP_007273825.1 | General secretion pathway protein F | VFG2049 | Protein | 2e-89 | 53 |
| VPBB_0125 | YP_007273825.1 | General secretion pathway protein F | VFG0181 | Protein | 1e-84 | 47 |
| VPBB_0125 | YP_007273825.1 | General secretion pathway protein F | VFG1870 | Protein | 1e-75 | 42 |
