|
Name : VPBB_1309 (VPBB_1309) Accession : YP_007274970.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : TypeVI secretion Hcp protein, biofilm development Function : - COG functional category : - COG ID : - EC number : - Position : 1467305 - 1467823 bp Length : 519 bp Strand : + Note : Equivalent to RIMD VP1393 BfdA DNA sequence : ATGCCAACTCCAGCATATATGTCTATCAACGGTGAAACTCAAGGTCACATTACTAAAGATACATACTCTGCAGATTCAGT AGGTAACACATGGCAAGAAGCTCACGTTGATGAGTTCCTAGTACAAGAACTTGATCACGTGCTAACTGTTCCACGTGATC CACAAAGTGGTCAACCTACTGGTCAACGTGTACACCGTCCACTTGTTGTGACTAAAGTTCAAGACCGTTCTTCTCCACTA CTATTTAACGCATTAGTGTCTGGTGAAAAACTTCCTGAGTGTTTGATTCGTTTCTACCGTACTTCAGTTCAAGGCAAGCA AGAGCACTACTACTCAATCAAGCTGATTGATGCGCTATTGGTAGATATCCAAACTCGTATGAACCACTGTCAAGATGCAG CAACAGCTGATCGCGTTACAGAAGAAGTTCTTAAGTTTACTTACCGTGCAATCGAAGTAACTCACGAAAACTGTGGTACA GCTGGTAACGACGACTGGCGTGCTCCACGCGAAGCATAA Protein sequence : MPTPAYMSINGETQGHITKDTYSADSVGNTWQEAHVDEFLVQELDHVLTVPRDPQSGQPTGQRVHRPLVVTKVQDRSSPL LFNALVSGEKLPECLIRFYRTSVQGKQEHYYSIKLIDALLVDIQTRMNHCQDAATADRVTEEVLKFTYRAIEVTHENCGT AGNDDWRAPREA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec16 | YP_851428.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-38 | 53 |
| aec16 | AAQ96710.1 | Aec16 | Not tested | AGI-1 | Protein | 1e-38 | 53 |
| HH0243 | NP_859774.1 | hypothetical protein | Not tested | HHGI1 | Protein | 1e-31 | 44 |
