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Name : VPBB_1037 (VPBB_1037) Accession : YP_007274711.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1149032 - 1150339 bp Length : 1308 bp Strand : + Note : Equivalent to RIMD VP1108 seryl-tRNA synthetase DNA sequence : ATGCTGGATTCTAAATTACTTCGTACAGAGCTGGATGAAACAGCTGCTAAACTGGCGCGTCGTGGCTTTAAGCTAGACGT AGAGACTATTCGTAAACTTGAAGAACAACGTAAGTCCATTCAAGTAGAAGTAGAAAATTTACAATCCACGCGTAACTCCA TCTCCAAGCAAATTGGCCAAAAAATGGCGGCTGGCGACAAAGAAGGCGCAGAAGAGATCAAGAAACAAATCGGTACTCTA GGTAGCGATCTTGACGCGAAGAAAGTTGAACTTGAGCAAGTAATGGCTCAACTAGACGAATTCACGCTTTCTGTACCAAA CATCCCAGCAGATGAAGTGCCAGATGGCAAAGACGAAAATGACAACGTTGAAATCTCTCGTTGGGGTGAGCCTAAGACTT ACGACTTCGATTTGAAAGACCACGTTGACCTAGGCGAAATGGGTGGCGGTCTAGACTTCGCAAGTGCAGTTAAGATCACT GGCGCACGTTTCATCGTGATGAAAGGTCAATTTGCTCGTCTACACCGTGCAATTGCTCAGTTCATGCTAGATCTTCATAC AGAAGAACATGGCTACACAGAGATGTACGTACCTTACCTAGTGAACTCTGACAGCCTATTCGGTACTGGTCAGCTTCCTA AGTTCGGTAAAGATCTTTTCCACACTGAGCCTCTAGCGGAAAAAGTAAACGACGAAGAGCCACGTAAACTGTCTCTAATC CCTACAGCAGAAGTACCAGTAACGAACCTAGTTCGTGACACTATCACTGACGAAGCGGATCTACCTATCAAGATGACAGC CCACACGCCATGTTTCCGTTCAGAAGCGGGTTCATACGGTCGTGATACTCGTGGTCTGATTCGTATGCACCAGTTCGACA AAGTTGAGCTAGTACAAATCACGAAGCCAGAAGATTCAATGAACGCGCTAGAAGAGCTAACAGGTCACGCTGAGAAAGTT CTACAACTTCTTGAACTTCCTTACCGTAAAGTCGTTCTATGTACAGGCGACATGGGCTTCGGCGCTCGTAAAACTTACGA CCTAGAAGTTTGGGTTCCTGCTCAAGAAACTTACCGTGAAATCTCTTCATGTTCTAACATGTGGGACTTCCAAGCTCGTC GTATGCAAGCGCGTTTCCGTCGTAAAGGCGAGAAGAAACCTGAGCTTGTACACACGCTAAACGGTTCTGGTCTAGCAGTT GGTCGTACCATGGTTGCTATCCTAGAAAACAACCAAGAAGCAGACGGTCGCATTGCAATCCCTGCAGTACTTCAGAAGTA CATGGGCGGCGCAACGCACATCGGTTAA Protein sequence : MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQKMAAGDKEGAEEIKKQIGTL GSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDENDNVEISRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKIT GARFIVMKGQFARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI PTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPEDSMNALEELTGHAEKV LQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAV GRTMVAILENNQEADGRIAIPAVLQKYMGGATHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-98 | 56 |
