Gene Information

Name : mdeA (TepiRe1_0932)
Accession : YP_007271627.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_019954
Putative virulence/resistance : Resistance
Product : Methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 934172 - 935371 bp
Length : 1200 bp
Strand : +
Note : -

DNA sequence : 
ATGGACGGTAAAGTGAAAGGTTTTAATACAAAAGCTATTCATGCGGGACAAAAGCCCTGTCCTGTTACCGGAGCACATGT
AACTCCGATTTATCAAACTTCTACCTTTGTGTTTAAGGATGTGGACCAAGGTGCACGCAGGTTTGCAGGCGAGGAGGAGG
GCTATATCTACACAAGGCTCGGCAACCCTACTTTAACCGAGCTTGAGGCAAAAGTCGCCGCATTGGAAGGCGGAGAAGCA
GCTATCGGCGCAGCTTCCGGCATGGCTGCAATCTCCACCGCACTTGTAACGCTTTTGAAGAAAGGCGATCATATTGTAGC
AGGTGATGCCCTCTATGGATGTACCCACAGTTTTATAAGCGAGATTTTACCGCAATACGGTATTGAGGTAACCATGGTGG
ATACATCTAATTTGGAAAACATCGAAAACGCAATGAAACCTAACACTAAAGTAATTTATGTAGAAACTCCGGCAAATCCC
ACAATGAAGCTTGTAGATTTGGAAGGTGCCTCCGACATAGCTCATAAACACGGTGCAATTATTATAGTTGACAACACATT
TATGTCGCCTTATCTGCAGCGCCCCATCGAACACGGTGTTGACGTAGTTGTTCACAGTGCCACAAAATATATAGGCGGGC
ATGGCGATGTGCTTGCAGGCCTGATAATCGGGCCCAAGGAACTGATAGATACTATGCGCATACCTTATTTAAAGGATTTT
GGCGGAATTTTATCGCCTTTTGATGCATGGCTTTTACTGAGAGGACTTAAAACTCTAGGAGTTAGAATGGATCGGCACTG
TGCCAATGCACAAAAGGTAGCGGAATACTTGGAAAAACATCCGTTGATTGATAAAGTTTACTATCCGGGCCTTCCATCAC
ATCCGCAGTATGAACTGGCAAAGAAACAAATGGACGGTTTTGGCGGCATGATGAGCTTCGAGCTGAAAGGCGGTCTTGAA
GCAGGTAAAGTATTGATGAATAGCGTAAAAATGATAACACTTGCCGTAAGTCTGGGTTGTGTTGATTCGCTTATCCAGCA
TCCGGCTTCTATGACACATTCGCCGGTGCCGCGTGAGGAAAGGCTGAAGGCAGGCATTACCGATGGGCAGGTAAGACTTT
CGGTCGGCATCGAAGATGTGGAAGATATTATCGCAGACTTGGATCAGGCTTTAAAAGAAGTTGAAAAACAAACAATGTAA

Protein sequence : 
MDGKVKGFNTKAIHAGQKPCPVTGAHVTPIYQTSTFVFKDVDQGARRFAGEEEGYIYTRLGNPTLTELEAKVAALEGGEA
AIGAASGMAAISTALVTLLKKGDHIVAGDALYGCTHSFISEILPQYGIEVTMVDTSNLENIENAMKPNTKVIYVETPANP
TMKLVDLEGASDIAHKHGAIIIVDNTFMSPYLQRPIEHGVDVVVHSATKYIGGHGDVLAGLIIGPKELIDTMRIPYLKDF
GGILSPFDAWLLLRGLKTLGVRMDRHCANAQKVAEYLEKHPLIDKVYYPGLPSHPQYELAKKQMDGFGGMMSFELKGGLE
AGKVLMNSVKMITLAVSLGCVDSLIQHPASMTHSPVPREERLKAGITDGQVRLSVGIEDVEDIIADLDQALKEVEKQTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-62 44
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-67 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-68 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mdeA YP_007271627.1 Methionine gamma-lyase BAC0207 Protein 2e-94 54