Gene Information

Name : lolD (TepiRe1_1960)
Accession : YP_007272754.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_019954
Putative virulence/resistance : Resistance
Product : Lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1878575 - 1879258 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGAATTTATTGGAAGTAAATGCTGTTAGCAAAACCTATGGTACAGGGGAAGCCGCAGTCAACGCATTAAAGAATGTCAG
TTTTTCCGTTCCCAAAGGGGAATTTGTCGCCATTGTTGGTGAATCGGGTTCCGGGAAAAGCACACTCTTGAATATGATAG
GGGCGCTCGATACGCCTACGTCCGGGAATGTTCTGATAGACGGCAAGGATATATTCCGCATGAGCGACGAAAAACTTACT
ATTTTTCGTCGTCGTAACATAGGCTTTATCTTTCAGGCATATAACCTTATTCCCGAACTCAACGTTGAGCAGAATATCAC
TTTTCCCGTATTGCTCGATTATAAAAAGCCGGATAAGGCGTATGTAGAGGAAATTCTTACAGTCCTTTCTCTGCAGGACA
GACGAAACCACCTACCCCGGCAGTTATCTGGCGGGCAGCAACAGCGTGTGGCGATTGGCCGCGCTTTGATTACCCGCCCC
ATGTTGATACTTGCAGACGAGCCGACCGGCAATTTGGACAGCCAAAACTCGAGCGAGGTAATTTCTCTTCTGAAAACAGC
ATCCAAACGCTACCAACAGACAATTATCATGATTACGCATAATCGTAGTATTGCTTCCACGGCTGACCGTGTACTGCAAA
TGTCGGACGGCGTATTAACCGATTTGGGGGGATACGCCGAATGA

Protein sequence :
MNLLEVNAVSKTYGTGEAAVNALKNVSFSVPKGEFVAIVGESGSGKSTLLNMIGALDTPTSGNVLIDGKDIFRMSDEKLT
IFRRRNIGFIFQAYNLIPELNVEQNITFPVLLDYKKPDKAYVEEILTVLSLQDRRNHLPRQLSGGQQQRVAIGRALITRP
MLILADEPTGNLDSQNSSEVISLLKTASKRYQQTIIMITHNRSIASTADRVLQMSDGVLTDLGGYAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-39 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-41 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 45
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007272754.1 Lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 1e-88 81
lolD YP_007272754.1 Lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 1e-58 55
lolD YP_007272754.1 Lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 5e-40 43
lolD YP_007272754.1 Lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-37 42
lolD YP_007272754.1 Lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7685735. Protein 4e-39 41