Gene Information

Name : TepiRe1_1907 (TepiRe1_1907)
Accession : YP_008619090.1
Strain : Tepidanaerobacter acetatoxydans Re1
Genome accession: NC_019954
Putative virulence/resistance : Virulence
Product : putative UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 1825950 - 1827314 bp
Length : 1365 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme

DNA sequence :
ATGAATCTATATAATTCAATCAAAAATAAAAAAGAAAAAATCTCAGTAACGGGACTAGGTTATGTTGGGCTACCACTTGC
AATTTCCTTTGCAAAAGTTGCAGATGTAGTGGGATTTGATATATCGAAAGAAAAGGTGAGTCAATACTTAAATGGAATAG
ATATTACAAAAGAAGTTGGAGATGAAACAATAAAACAGACAACTGCATTACTTACATGGGAAGAAAAGTATTTAAAGGAT
TGCAAGTTTCATATCGTAGCAGTGCCAACACCTATTAATGCGGATAAGACCCCAGATTTGAAACCGGTCATAAATGCCAG
TAAAACTTTGGGTAGAAATCTAACTAATGGTTCTATAGTAGTATATGAATCCACGGTTTACCCCGGAGTTACAGAAGATA
TTTGTGTGCCGATATTAGAGCAAGAGTCTGGGTTAAAGGGTGGTGTAGACTTTAAAGTCGGCTACTCTCCCGAAAGAATT
AATCCTGGAGATAAGGTACACAGGCTGGAGTCCATAGTAAAGGTCGTGTCAGGCATAGATGAAGAATCATTAGAAACTAT
CGCTAAAGTATATGAGCTGGTAGTAAAAGCCGGTGTATATAGAGCTAAAAGTATAAAAGTTGCCGAGGCCGCAAAAGTCA
TAGAGAATTCTCAAAGAGATATAAACATAGCTTTCATGAATGAACTTTCCATTATTTTTAACAAAATGGGAATAGATACA
AAGGCAGTATTAGAGGCCGCAGGAACAAAATGGAACTTTTTAAATTTCAATCCTGGTCTTGTAGGAGGCCACTGTATAGG
AGTAGATCCGTATTATCTGACATACAAAGCAGAGCAAATAGGGTACCATTCCCAAATCATCCTTGCCGGTAGAAAGATAA
ATGATGATATGGGTAAATATGTTGCCGAGAATGCTGTAAAAAGTATGATAAAGGCTGACAAACAAGTTAAAGGCTCAACA
GTTGCTGTATTCGGAATAACATTTAAGGAAAATTGCCCTGATGTAAGAAATACAAAAGTAGTTGACATAATTAATGAACT
TAAAGAGTATGGGATAGAAACAAAAGTTATAGATCCGGTTGCAGACAAAGACGAATTATGGAATACTTATGGAATAGAAT
TGTGTAATTTTGAAGAAATAAGTGATATAGATGCAGCGGTGTTTGCCGTGCCGCATAATGAATTTAAATCCATAAGACTG
GAAGATATTAAAAAGATATTTAATCAAAGATGGAATGGGCATAGAGATACAACAACAGAGGTTCATGATAGTAATTTCAA
TAATAAATATGTTTTAATTGACATAAAAGGAATATTTGATAAAAAAGAAGCAGAAGATATGAACTTCCAGTATTGGAGGC
TTTAA

Protein sequence :
MNLYNSIKNKKEKISVTGLGYVGLPLAISFAKVADVVGFDISKEKVSQYLNGIDITKEVGDETIKQTTALLTWEEKYLKD
CKFHIVAVPTPINADKTPDLKPVINASKTLGRNLTNGSIVVYESTVYPGVTEDICVPILEQESGLKGGVDFKVGYSPERI
NPGDKVHRLESIVKVVSGIDEESLETIAKVYELVVKAGVYRAKSIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDT
KAVLEAAGTKWNFLNFNPGLVGGHCIGVDPYYLTYKAEQIGYHSQIILAGRKINDDMGKYVAENAVKSMIKADKQVKGST
VAVFGITFKENCPDVRNTKVVDIINELKEYGIETKVIDPVADKDELWNTYGIELCNFEEISDIDAAVFAVPHNEFKSIRL
EDIKKIFNQRWNGHRDTTTEVHDSNFNNKYVLIDIKGIFDKKEAEDMNFQYWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-107 58
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-100 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-100 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TepiRe1_1907 YP_008619090.1 putative UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-100 56