|
Name : yliA (BN45_110016) Accession : YP_007270395.1 Strain : Mycobacterium canettii CIPT 140070017 Genome accession: NC_019952 Putative virulence/resistance : Unknown Product : Putative peptide transport fused subunits of ABC superfamily: ATP-binding components Function : - COG functional category : - COG ID : - EC number : - Position : 4220758 - 4222404 bp Length : 1647 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10978546, 12657046, 12775759, 15525680; Product type pt : putative transporter DNA sequence : ATGAGCGTCCCAGCAGCGCCGCTGTTGTCGGTGGAGGGCCTGGAAGTTACGTTCGGCACCGATGCTCCCGCCGTGTGTGG GGTGGATCTGGCCGTCCGGAGCGGTCAAACCGTCGCCGTGGTGGGTGAGTCCGGGTCGGGCAAATCCACGACGGCCGCGG CGATTCTTGGGTTGCTTCCGGCTGGTGGACGGATCACCGCTGGACGCGTTGTGTTCGACGGGCGCGACATCACCGGGGCC GATGCCAAGCGGCTACGGTCGATAAGGGGACGGGAGATCGGCTATGTTCCCCAGGATCCGATGACCAACCTCAATCCGGT TTGGAAGGTCGGCTTTCAGGTCACAGAAGCGTTGCGGGCCAATACCGACGGTCGCGCAGCACGACGACGGGCGGTGGAGC TACTCGCTGAGGCGGGCCTGCCGGATCCGGCGAAGCAAGCCGGACGCTACCCGCATCAGCTGTCCGGCGGCATGTGCCAG CGGGCGTTGATTGCGATCGGCTTGGCGGGCAGGCCGCGGCTGCTGATCGCCGATGAGCCGACGTCCGCGTTGGATGTCAC CGTGCAGCGGCAGGTGCTCGATCATCTTCAGGGACTCACCGACGAACTAGGCACCGCGCTGCTACTGATCACCCACGATC TGGCGTTGGCCGCGCAGCGGGCCGAGGATGTCGTCGTCGTCCGTCGTGGAGTGGTGGTGGAATCCGGTGCGGCGCAGTCA ATCCTGCAAAGCCCTCAGCACGAGTACACCCGGCGCCTGGTGGCCGCGGCTCCATCGCTGACGGCGCGCAGCAGACGTCC GCCGGAATCCCGGTCGCGGGCAACCACGCAGGCCGGCGACATTCTCGTCGTCTCGGAGCTGACCAAGACTTACCGGGAGT CCCGCGGCGCGCCGTGGCGGCGGGTGGAGTCTCGCGCCGTGGACGGGGTGTCATTCCGGCTACCGCGGGCGAGCACGTTG GCGATCGTGGGCGAATCCGGGTCAGGCAAGTCGACGCTAGCGCGGATGGTGCTTGGGCTGCTCCAACCTACCTCGGGCAC GGTCGTTTTCGACGGCACCTACGACGTCGGCGCGCTGGCCCGGGACCAGGTGCTGGCCTTTCGCCGCCGGGTCCAGCCGG TGTTCCAAAACCCATACAGCAGCCTGGATCCCATGTACTCGGTGTTTCGCGCCATCGAGGAACCGTTACGCGTCCATCAC GTCGGTGACCGCTGGCAGCGGCAAAGGGCGGTGCGTGAGCTGGTCGATCAGGTGGCGCTGCCGTCGTCGATACTGGGCCG GCGGCCCCGTGAGCTGTCGGGTGGTCAGCGGCAGCGGGTAGCGATCGCGCGTGCGCTGGCGCTGCGCCCGGAGGTATTGG TGTGCGACGAAGCGGTGTCGGCGCTCGACGTATTGGTGCAGGCACAGATCCTGGATCTGCTGGCCGATCTGCAGGCCGAC CTGGGTTTGACGTATTTGTTCATCAGCCATGATCTGGCGGTGATCCGGCAGATTGCCGACGACGTCCTGGTCATGCGGGC CGGCCGGGTGGTGGAGCACGCCTCTACCGAGGAGGTGTTCAGCCTGCCCCGCCACGAGTACACCCGCCAGTTGCTTCAGG CCATTCCCGGTGCCCCCTCAGCTCCCCGAAAGGTTGGCAACCTGTGA Protein sequence : MSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGA DAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQ RALIAIGLAGRPRLLIADEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEDVVVVRRGVVVESGAAQS ILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKTYRESRGAPWRRVESRAVDGVSFRLPRASTL AIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHH VGDRWQRQRAVRELVDQVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILDLLADLQAD LGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSLPRHEYTRQLLQAIPGAPSAPRKVGNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-123 | 57 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
