Gene Information

Name : sigC (BN45_50376)
Accession : YP_007268755.1
Strain : Mycobacterium canettii CIPT 140070017
Genome accession: NC_019952
Putative virulence/resistance : Unknown
Product : Putative RNA polymerase sigma factor, ECF subfamily, SigC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2417327 - 2417884 bp
Length : 558 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10027986, 12368446, 12657046, 12775759, 9713650; Product type pf : putative factor

DNA sequence :
ATGACCGCGACGGCAAGCGACGACGAGGCCGTTACCGCACTCGCCTTGTCGGCGGCCAAGGGGAACGGGCGGGCCCTTGA
GGCGTTTATCAAAGCCACCCAGCAAGACGTGTGGCGGTTCGTCGCCTATCTGTCCGACGTGGGCAGTGCGGACGATCTCA
CCCAAGAGACATTCCTACGAGCGATCGGCGCCATCCCGCGGTTTTCCGCACGCTCCAGCGCCCGAACTTGGTTGCTGGCC
ATCGCGCGCCATGTCGTCGCCGATCACATCCGCCACGTCCGATCCCGGCCCCGCACCACCCGCGGCGCGAGTCCCGAACA
TCTCATAGACGGCGACCGCCATGCCCGCGGATTCGAAGACCTCGTCGAGGTAACCACGATGATCGCCGACCTAACCACCG
AGCAACGGGAAGCGCTGCTGCTGACCCAGCTGCTCGGGCTGTCCTATGCGGACGCCGCGGCGGTGTGCGGCTGCCCGGTG
GGCACCATCCGATCCCGTGTCGCTCGAGCGCGCGATGCGCTGCTTGCCGACGCGGAGCCCGACGACCTCACCGGCTAG

Protein sequence :
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLA
IARHVVADHIRHVRSRPRTTRGASPEHLIDGDRHARGFEDLVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPV
GTIRSRVARARDALLADAEPDDLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigC YP_005126716.1 ECF-family sigma factor C Not tested Not named Protein 2e-34 53