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Name : clpB (BN42_20110) Accession : YP_007263103.1 Strain : Mycobacterium canettii CIPT 140070010 Genome accession: NC_019951 Putative virulence/resistance : Virulence Product : Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (Heat Shock Protein f84.1) Function : - COG functional category : - COG ID : - EC number : - Position : 477497 - 480043 bp Length : 2547 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10493122, 10510226, 11271494, 11385512, 11567012, 12368446, 12657046, 15525680, 17611072; Product type pf : putative factor DNA sequence : GTGGACTCGTTTAACCCGACGACCAAGACGCAGGCGGCGCTGACCGCGGCGTTACAGGCGGCTTCGACCGCCGGCAATCC CGAGATCCGGCCCGCTCACCTGCTGATGGCGCTGCTGACCCAAAACGACGGGATCGCCGCACCGCTGCTGGAGGCTGTCG GCGTCGAGCCCGCCACCGTCCGCGCAGAAACCCAGCGCCTGCTGGACCGGTTGCCACAGGCCACCGGGGCCAGCACGCAG CCGCAGCTGTCTCGCGAGTCGCTGGCGGCGATCACCACCGCCCAGCAGCTGGCCACCGAGATAGACGACGAGTACGTCTC CACCGAGCACGTGATGGTCGGGCTGGCCACCGGTGACTCCGACGTCGCCAAGCTGTTGACCGGCCACGGCGCCTCGCCGC AGGCGTTGCGGGAGGCGTTCGTCAAGGTGCGCGGCAGCGCCCGGGTCACCAGCCCCGAACCGGAGGCGACGTATCAGGCG CTGCAGAAGTACTCCACCGACCTGACCGCCCGCGCCCGCGAAGGCAAACTCGACCCGGTCATCGGCCGCGACAACGAGAT CCGCCGCGTGGTGCAGGTGCTCTCCCGTCGCACCAAGAACAACCCGGTGCTGATCGGTGAGCCCGGCGTCGGCAAGACCG CGATCGTGGAGGGCCTGGCGCAGCGGATCGTGGCCGGCGACGTGCCGGAGAGTTTGCGGGACAAGACGATCGTCGCGCTC GATCTCGGCTCGATGGTCGCCGGTTCGAAATACCGCGGCGAATTCGAGGAACGGCTCAAGGCCGTCCTCGACGACATCAA GAACTCGGCCGGCCAAATCATCACGTTCATCGACGAGCTGCACACCATCGTCGGCGCGGGTGCCACCGGCGAGGGCGCGA TGGACGCCGGCAACATGATCAAGCCGATGCTGGCCCGCGGCGAGTTACGGCTGGTCGGGGCGACCACACTTGACGAGTAC CGCAAGCACATCGAGAAGGACGCCGCGCTCGAGCGTCGTTTTCAGCAGGTGTACGTCGGCGAGCCGTCGGTGGAGGACAC CATCGGCATCCTGCGCGGACTCAAAGACCGCTACGAGGTGCACCACGGGGTGCGCATCACCGACTCGGCACTGGTGGCAG CTGCCACTTTGAGTGACCGGTATATCACCGCCCGCTTTCTGCCGGACAAGGCCATCGACCTGGTCGACGAGGCGGCCAGC CGGCTGCGCATGGAGATCGACTCGCGGCCCGTCGAGATCGACGAGGTCGAGCGGCTGGTGCGCCGGCTGGAGATCGAAGA GATGGCGCTGTCCAAGGAGGAGGACGAGGCGTCGGCGGAGCGGTTGGCCAAGCTGCGCTCCGAGCTGGCCGATCAGAAAG AGAAGTTGGCCGAACTTACCACCCGCTGGCAGAACGAGAAGAACGCCATCGAAATCGTCCGCGACCTCAAAGAGCAGCTG GAAGCCCTGCGCGGGGAATCGGAGCGGGCCGAACGCGACGGCGACCTGGCCAAGGCCGCCGAGCTGCGCTACGGACGCAT CCCCGAGGTGGAGAAGAAACTCGACTCGGCGCTGCCGCAGGCGCAGGCCCGGGAGCAGGTGATGCTCAAGGAGGAGGTCG GTCCCGACGACATCGCCGACGTGGTGTCGGCGTGGACCGGCATTCCGGCCGGGCGGCTGCTGGAAGGCGAGACCGCCAAG CTGCTGCGCATGGAAGACGAGCTGGGCAAGCGGGTCATCGGGCAGAAGGCCGCGGTTACCGCAGTCTCTGATGCGGTGCG GCGCAGCCGGGCCGGGGTGTCCGACCCCAACCGGCCCACCGGGGCGTTCATGTTCCTCGGCCCGACCGGTGTCGGCAAGA CCGAGCTGGCCAAGGCGCTGGCCGACTTCCTGTTCGACGACGAGCGGGCGATGGTCCGCATCGACATGAGCGAGTACGGC GAGAAGCACACCGTGGCCCGGTTGATCGGCGCCCCGCCCGGCTATGTGGGATATGAGGCGGGCGGTCAGCTGACCGAGGC GGTGCGCCGGCGTCCCTACACGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCACCCGGACGTGTTCGACGTGCTGCTGC AGGTCCTCGACGAGGGCCGGCTCACCGACGGGCACGGCCGCACGGTCGACTTCCGCAACACCATCTTGATCCTGACGTCC AACCTGGGGTCGGGTGGCAGCGCCGAGCAGGTGCTGGCCGCGGTGCGCGCTACGTTCAAGCCGGAGTTCATCAACCGGCT CGACGACGTGCTCATCTTTGAGGGTCTCAACCCCGAAGAGCTGGTGCAGATCGTGGACATCCAGCTGGCGCAGCTGGGCA AGCGGCTGGCGCAGCGGCGGCTGCAGCTGCAGGTCTCGCTGCCGGCCAAGCGCTGGTTGGCGCAGCGCGGATTCGACCCG GTGTACGGGGCGCGGCCGTTGCGCCGGCTGGTGCAGCAGGCCATCGGTGACCAGCTGGCCAAGATGCTGCTCGCCGGCAC CGTGCACGACGGCGACACCGTGCCGGTCAACGTCAGCCCCGACGCCGACTCGCTGATCCTGGGCTGA Protein sequence : MDSFNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLLDRLPQATGASTQ PQLSRESLAAITTAQQLATEIDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRGSARVTSPEPEATYQA LQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVAL DLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEY RKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAAS RLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQL EALRGESERAERDGDLAKAAELRYGRIPEVEKKLDSALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAK LLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYG EKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTS NLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVQIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDP VYGARPLRRLVQQAIGDQLAKMLLAGTVHDGDTVPVNVSPDADSLILG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-105 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-105 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-105 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007263103.1 | Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (Heat Shock Protein f84.1) | VFG2076 | Protein | 3e-112 | 44 |
| clpB | YP_007263103.1 | Putative endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (Heat Shock Protein f84.1) | VFG2084 | Protein | 3e-112 | 42 |
