Name : hsdM (BN42_40735) Accession : YP_007265483.1 Strain : Mycobacterium canettii CIPT 140070010 Genome accession: NC_019951 Putative virulence/resistance : Unknown Product : Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase) Function : - COG functional category : - COG ID : - EC number : 2.1.1.- Position : 3190039 - 3191700 bp Length : 1662 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12657046, 15525680; Product type pe : putative enzyme DNA sequence : ATGCCGCCCAGGAAGAAGCAGGCGCCGCAGGCGCCGTCGACGATGAAGGAGCTCAAAGACACGCTCTGGAAGGCCGCCGA CAAGCTGCGCGGGTCGGTGTCGGCCAGCCAATACAAGGACGTGATCCTGGGCCTGGTGTTCCTTAAGTACGTGTCCGACG CCTACGACGAGCGGCGCGAGGCGATCCGTGCCGAGTTGGCGGCCGACGGGATGGAGGAGTCTCAGATAGAAGACTTGATC GACGATCCCGAGGAGTACCAGGGTTACGGCGTGTTCGTGGTGCCGGTGAGTGCGCGCTGGAAGTTCTTGGCAGAGAACAC AAAAGGCAAGCCGGCCGTTGGTGGTGAGCCGGCGAAGAACATCGGTCAGCTGATCGACGAGGCGATGGACGCGGTAATGA AGGCCAATCCAACACTCGGTGGGACGCTGCCGCGGCTGTATAACAAGGACAACATCGACCAGCGCCGGCTCGGTGAGCTG ATCGACCTATTTAACAGTGCGCGCTTCAGCCGGCAGGGCGAGCACCGCGCCCGGGATCTGATGGGGGAGGTCTACGAATA CTTCCTCGGCAATTTCGCTCGCGCGGAAGGGAAGCGGGGTGGCGAGTTCTTTACCCCGCCCAGCGTGGTCAAGGTGATCG TGGAGGTGCTGGAGCCGTCGAGTGGGCGGGTGTATGACCCGTGCTGCGGTTCCGGAGGCATGTTTGTGCAGACCGAAAAG TTCATCTACGAACACGACGGCGATCCGAAGGATGTCTCGATCTATGGCCAGGAAAGCATTGAGGAGACCTGGCGGATGGC GAAGATGAACCTCGCCATCCACGGCATCGACAATACGGGGCTCGGCGCCCGATGGGGTGATAGCTTCGCTCGCGACCAGC ACCCGGACGTGCGGATGGACTACGTGATGGCCAATCCACCGTTCAACATCAAAGACTGGGCCCGCAACGAGGAAGACCCA CGCTGGCGCTTCGGTGTTCCGCCCGCCAACAACGCCAACTACGCATGGATTCAGCACATCCTGTACAAGTTGGCGCCGGG GGGTAGGGCGGGCGTGGTGATGGCCAACGGGTCGATGTCGTCGAACTCCAACGGCGAGGGGGATATTCGCGCGCAGATCG TGGAGGCGGATTTGGTCTCTTGCATGGTCGCGTTACCCACCCAGCTGTTCCGCAGCACCGGAATCCCGGTGTGCCTGTGG TTTTTCGCCAAGGACAAGGCGGCGGGTAAGCAGGGGTCTATCGACCGGTGCGGGCAGGTGCTGTTCATCGATGCGCGCGA ACTGGGCTACATGGTGGACCGAGCCGAGCGGGCGCTGACCAACGAGGAGATCGTTCGCATCGGTGACACCTATCACGCAT GGCGCGGGTCGAAGTCGGCTGCTGCCAAAGGGATTATGTACGAGGATGTTCCGGGTTTCTGTAAGTCGGCGACGTTGGCG GAGATCAAGGCGACCGACTATGCGCTCACGCCGGGGCGGTATGTGGGTACGCCCGCGGTCGAGGACGACGGAGAGCCGAT CGACGAGAAGATGGCCCGGTTGACGAAGGCGTTGCTGGAGGCGTTCGATGAGTCGGCGCGGCTGGAAAGGGTCGTGCGGG AGCAACTGGGGCGGCTGAGACGAGCGATGGATGGAAAACCTTGCGGTTCGGGGAGTCCTTGA Protein sequence : MPPRKKQAPQAPSTMKELKDTLWKAADKLRGSVSASQYKDVILGLVFLKYVSDAYDERREAIRAELAADGMEESQIEDLI DDPEEYQGYGVFVVPVSARWKFLAENTKGKPAVGGEPAKNIGQLIDEAMDAVMKANPTLGGTLPRLYNKDNIDQRRLGEL IDLFNSARFSRQGEHRARDLMGEVYEYFLGNFARAEGKRGGEFFTPPSVVKVIVEVLEPSSGRVYDPCCGSGGMFVQTEK FIYEHDGDPKDVSIYGQESIEETWRMAKMNLAIHGIDNTGLGARWGDSFARDQHPDVRMDYVMANPPFNIKDWARNEEDP RWRFGVPPANNANYAWIQHILYKLAPGGRAGVVMANGSMSSNSNGEGDIRAQIVEADLVSCMVALPTQLFRSTGIPVCLW FFAKDKAAGKQGSIDRCGQVLFIDARELGYMVDRAERALTNEEIVRIGDTYHAWRGSKSAAAKGIMYEDVPGFCKSATLA EIKATDYALTPGRYVGTPAVEDDGEPIDEKMARLTKALLEAFDESARLERVVREQLGRLRRAMDGKPCGSGSP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-123 | 50 |
hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-124 | 50 |
hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-123 | 49 |
api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 1e-109 | 45 |