Gene Information

Name : Metfor_2202 (Metfor_2202)
Accession : YP_007249715.1
Strain : Methanoregula formicicum SMSP
Genome accession: NC_019943
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2169886 - 2170107 bp
Length : 222 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGAAGAATAAGATCAAGGTCTTCCGTGCCATGCACGATATGACCCAGGAAGACCTTGCGCAGGCAATTGGGGTGACCCG
TCAGACCATCCTCGCCATCGAAAAGGGAAAGTACGTACCCTCGCTTGACCTTGCATTCCGCATTGCCCGGCACTTTGCGG
TGAATATCGAAGAAGTCTTCACGTACGAGGACGAGCCCCCGGCAGCTGGGGGCCGGAGCTGA

Protein sequence :
MKNKIKVFRAMHDMTQEDLAQAIGVTRQTILAIEKGKYVPSLDLAFRIARHFAVNIEEVFTYEDEPPAAGGRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-10 45
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-08 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metfor_2202 YP_007249715.1 putative transcriptional regulator VFG2175 Protein 1e-08 42
Metfor_2202 YP_007249715.1 putative transcriptional regulator VFG2168 Protein 1e-08 42