Gene Information

Name : Metfor_1837 (Metfor_1837)
Accession : YP_007249367.1
Strain : Methanoregula formicicum SMSP
Genome accession: NC_019943
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1789716 - 1790600 bp
Length : 885 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGCCGATAAGGATAGGGACCCGGGGCAGCAAGCTCGCCCTTGTCCAGGCGGAGACAGTCATACAGAAACTCAGCGATCT
TGGGATCGAATCCGAGAAGGTTATCATTAACACGCAGGGCGACACTACGACCCATGTCCCGCTCCACGAGATCGGCGGGC
AGGGTGTCTTTGTCCGGGCACTGGACGACGCGATCCTCGCGGGAACCATCGACTGCGCCGTCCACAGCATGAAGGATATC
CCGGCCATCCGCCCGAGCGGCCTTGTTACCGCCGCCATCCTGAAGCGCGACTCGCCGGCGGATTACCTTGCCCACAAGGG
CGAATTTGCCCACGTGCGGGTCATCGGCACATCGAGCACGCGCCGGAAAGCACAGCTCCTCCGGCACGATCCAGGGATCA
CGATCCGGGATCTCCGCGGGAACGTGGATACCCGGATCCGGAAGATGGCAGCCGGCGAGTACGACGGCATCATGCTCGCC
GAGGCAGGCCTCCAGCGGCTCGGCATTAAGATCGACGGCCAGCGGCTCCCTCCGGAAAAGTTCGTCCCGTCCCCCAACCA
GGGGACGGTCGCTGTCGTGAGCAGGGCTGACCCCTCGCTCATGGAAGTGCTCTCGGCTCTCGACCACCCGGAGACCCGCA
CCGACATTGCCATCGAGCGGGCCGTAATGGAACAGCTCGGCGGCGGCTGCTTCACGCCGCTGGGAATCTTCTCCCGCGGC
GGGCACCTCATCGCCGAGGTGCTCTCGCTGGACGGGGGCCGGGCCGAGCGGGTCGAGGTTGATGTAAAGGACATCGCCCA
GGCACGGGAAGAGGGCGCGAAGCTGAAGGCAAAGGCCCAGGACCTGATAGACGAAGCGTACAAACGACTGGGGATTACCG
GATGA

Protein sequence : 
MPIRIGTRGSKLALVQAETVIQKLSDLGIESEKVIINTQGDTTTHVPLHEIGGQGVFVRALDDAILAGTIDCAVHSMKDI
PAIRPSGLVTAAILKRDSPADYLAHKGEFAHVRVIGTSSTRRKAQLLRHDPGITIRDLRGNVDTRIRKMAAGEYDGIMLA
EAGLQRLGIKIDGQRLPPEKFVPSPNQGTVAVVSRADPSLMEVLSALDHPETRTDIAIERAVMEQLGGGCFTPLGIFSRG
GHLIAEVLSLDGGRAERVEVDVKDIAQAREEGAKLKAKAQDLIDEAYKRLGITG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-34 41
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-34 41