Gene Information

Name : Metfor_0171 (Metfor_0171)
Accession : YP_007247760.1
Strain : Methanoregula formicicum SMSP
Genome accession: NC_019943
Putative virulence/resistance : Unknown
Product : pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 163515 - 164411 bp
Length : 897 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGAAATTAGAAGAGCTGAGGTTTGGCACCGAGCTCCTCAAGCGCGGCTTTGCATCCATGCAGAAAGGGGGCGTGATCAT
GGATGTCGTCAATGCCGATCAGGCGAAGATAGCCGAAGAGGCAGGCGCAGTTGCGGTCATGTCGCTTGAGCGGGTGCCAT
CCGATATCAGGAAGGCGGGAGGCGTTGCCCGCATGGCAGATCCCGAGAAGGTCATGGAGATCATCGATGCGGTTTCCATT
CCGGTCATGGGCAAGGTCCGCATCGGCCACTTTGTCGAAGCGCAGGTCCTGGAAGTCCTTGGGGTCGACATGATCGATGA
GAGCGAGGTCCTGACCCCCGCAGACGAACAATACCATATCGACAAGAAGCAGTTCACGGTCCCCTTCGTCTGCGGCGCCC
GCGATCTCGGTGAGGCGCTCCGGAGGATCAATGAGGGTGCGGCCATGATCCGGACCAAGGGAGAGGCCGGTACCGGCAAT
GTCGTGGAAGCAGTCCGCCATATGAGGACAATCATGGGAGAGATCCGGATGCTCCGCGGACTGGACAAGCAGGAGATGGC
CGATTATGCCCGCGAGATTGAAGCTCCCGCGGAACTGGTCTTTGAATGCGCCGAGCGCGGCAGGCTCCCGGTCGTGAACT
TCTCCGCAGGCGGTATCGCCACCCCCTCAGACGCGGCGCTCATGATGCAGCTGGGTGCGGACGGTGTCTTTGTTGGGTCC
GGCATCTTCAAATCCTCGAACCCGAAGCTGATGGCCAAAGCCATTGTCGAGGCGGTCAACCATTTCGACGATGCAGAAGT
GCTCGCAAAGGTCAGCAAAGGCCTTGGCGACGCCATGCCTGGCCTTGATGTCCACAAGCTCTCGGACGCCGAGGTGCTGC
AGACCCGTGGACGCTAA

Protein sequence :
MKLEELRFGTELLKRGFASMQKGGVIMDVVNADQAKIAEEAGAVAVMSLERVPSDIRKAGGVARMADPEKVMEIIDAVSI
PVMGKVRIGHFVEAQVLEVLGVDMIDESEVLTPADEQYHIDKKQFTVPFVCGARDLGEALRRINEGAAMIRTKGEAGTGN
VVEAVRHMRTIMGEIRMLRGLDKQEMADYAREIEAPAELVFECAERGRLPVVNFSAGGIATPSDAALMMQLGADGVFVGS
GIFKSSNPKLMAKAIVEAVNHFDDAEVLAKVSKGLGDAMPGLDVHKLSDAEVLQTRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-85 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-85 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-85 64