Gene Information

Name : AciM339_1287 (AciM339_1287)
Accession : YP_007247315.1
Strain : Aciduliprofundum sp. MAR08-339
Genome accession: NC_019942
Putative virulence/resistance : Unknown
Product : pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1151916 - 1152926 bp
Length : 1011 bp
Strand : -
Note : PFAM: SOR/SNZ family; Thiazole biosynthesis protein ThiG; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGCCATTTAATCTCAATCTGGAGAATATAAGATATGGAAGCGATTTAATAAAGAGGGGATTCGCCAAGATGCAGAAAGG
TGGAGTTATAATGGATGTTACAAATGCAGAGCAGGCTGCCATAGCTGAAGATGCTGGAGCCGTGGCCGTAATGGCTCTGG
AGCGTGTTCCAGCGGATATCCGTGCCGCTGGTGGAGTTGCAAGAATGGCGGATCCCAACAAGATTCAGGAGATAATGGAT
GCTGTTAGCATACCCGTGATGGCAAAGGTAAGGATAGGGCATATTAACGAGGCCCTTGCCCTTCAGGCACTTGGAGTTGA
TATGATTGACGAAAGCGAGGTATTGACACCAGCAGATCCATTTTATCACATAGATAAGAGAGATTTCACCATACCCTTTG
TCTGCGGTGCCAGGAACCTTGGAGAGGCCGTAAGGAGAATATGGGAAGGAGCAGCCATGATAAGAACCAAGGGAGAGGCA
GGCACTGGCAATGTCATTGAAGCCGTGAGACACATGCGCCTGGTAAACAGGGGCATTGAAGAGTTAAAATACAAGAACGA
GGCAGAAATCTACAAGATAGCAAAAAAGTATGCAGAACCTTATGAGAAACTGCTGAAACAGGTGAAGGAGTTCAACGGGA
TGCTTCCAGAAGTGGATCCCCATGAGCCCGTTTTTGGAAAATACACCCTAAATGACATAATTGAAGGCCTGTACAAGGAG
TTAATTGAGATAAGGAAACTTCAGCGCTTACCGGTTGTAAACTTTGCTGCCGGAGGAATTGCCACCCCTGCAGATGCTGC
CCTGATGATGAACCTTGGTGCAGATGGAGTTTTTGTGGGCTCAGGAATATTCAAATCCCCCAATCCCGAAGAGATGGCAA
GAGCCATAGTTGAGGCAGTTATGCATTACGATGAACCGGAAACCATAGCGGAAGTGTCCAAGGGTCTAAAGGGAATGTAC
GGACAGGAGATTTCCCAACTCAACGAGAGACTTCAGGAGAGAGGATGGTAA

Protein sequence :
MPFNLNLENIRYGSDLIKRGFAKMQKGGVIMDVTNAEQAAIAEDAGAVAVMALERVPADIRAAGGVARMADPNKIQEIMD
AVSIPVMAKVRIGHINEALALQALGVDMIDESEVLTPADPFYHIDKRDFTIPFVCGARNLGEAVRRIWEGAAMIRTKGEA
GTGNVIEAVRHMRLVNRGIEELKYKNEAEIYKIAKKYAEPYEKLLKQVKEFNGMLPEVDPHEPVFGKYTLNDIIEGLYKE
LIEIRKLQRLPVVNFAAGGIATPADAALMMNLGADGVFVGSGIFKSPNPEEMARAIVEAVMHYDEPETIAEVSKGLKGMY
GQEISQLNERLQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-59 57
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-59 57
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-59 56