|
Name : Thimo_3602 (Thimo_3602) Accession : YP_007245888.1 Strain : Thioflavicoccus mobilis 8321 Genome accession: NC_019940 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 3945508 - 3946794 bp Length : 1287 bp Strand : - Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGACGTCGTCATTTGATCTCTCGCGGGTGCGCATCGGGGTCGTCGGGCTCGGCTATGTCGGTCTGCCGCTCGCCGTCGA GCTTGGCCGGCGCTACCCGACCGTCGGCTTCGACATCGACGCGGCACGCATCGCCGAGCTGCGCGCCGGCCGCGACAGCT CGCTCGAGGTCGAGCCCGACAAGCTCGCCGCGAGCGCGCACCTCAGCTACGCGGAGCGGGTCGAGGACCTCGCCGGCTGC AACTTCTTCATCGTCACGGTCCCGACGCCGGTCGACGACCACAAGGAGCCGGACCTGCGCCCGCTACAGGCCGCGAGCCG CACCGTCGGCGGCGTGCTGGGGCGCGGCGACATCGTCGTCTACGAATCGACCGTCTATCCCGGCGCCACCGAGGAGGTCT GCGTGCCGATCCTCGAAGCGACCTCCGGGCTGACCTTCAACGATGGCTTTTTCGTCGGCTACAGCCCTGAGCGTATCAAC CCGGGGGACAAGGCCCACCGCCTGAGCGGCATCACCAAGGTCACCTCCGGCTCGACGCCCGAGGTCGCGGCATTCGTCGA CGCCCTCTACGCCAGCATCATCGTGGCGGGGACCCATCTGGCGAGCAGTATCCGTGTCGCCGAGGCCGCCAAGGTCATCG AGAACACCCAGCGCGATGTCAACATCGCGTTGATCAACGAGCTGGCGTTGATCTTCAATCGCCTCGGCATCGACACCGAC GAGGTGCTGGCGGCGGCCGGCAGCAAGTGGAACTTCCTGCCGTTCCGTCCCGGGCTGGTCGGCGGGCACTGCATCGGCGT CGATCCCTACTATCTGACCTACAAGGCGCAGGCGATCGGCTATCACCCGGAGGTCATCCTCGCCGGGCGTCGCCTGAACG ACAGCATGGGGGCCTATGTCGCAACCTGCGTCATCAAGCTGATGGCGCGGCGCGACCGGCTCTCGGCGGGCAGCCGCGTC CTGATCCTCGGGCTGACCTTCAAGGAGAACTGCCCGGACCTGCGCAACACCCGCGTCGTCGACATCGTCGCCGAGCTTCA GGACTACGGCCTCGCCTGCGACGTCCACGACCCCTGGGCCAATGTCGCCGAGGCGCGCCGCGAGTACGGCATCGAGCTGA TCTTCGAGCCGCCGGCGGCGACCTACGACGCTATCGTCCTCGCCGTCGCCCACCGCCAGTTCCAGGCGCTGGGGGCGACG GCGATCCGCGCCTTCGGCCGGCCCGGCGCCGTGGTCTACGACGTCAAGCACGTGCTGGCCAAGGAGGCGGTCGATGGGCG CCTCTGA Protein sequence : MTSSFDLSRVRIGVVGLGYVGLPLAVELGRRYPTVGFDIDAARIAELRAGRDSSLEVEPDKLAASAHLSYAERVEDLAGC NFFIVTVPTPVDDHKEPDLRPLQAASRTVGGVLGRGDIVVYESTVYPGATEEVCVPILEATSGLTFNDGFFVGYSPERIN PGDKAHRLSGITKVTSGSTPEVAAFVDALYASIIVAGTHLASSIRVAEAAKVIENTQRDVNIALINELALIFNRLGIDTD EVLAAAGSKWNFLPFRPGLVGGHCIGVDPYYLTYKAQAIGYHPEVILAGRRLNDSMGAYVATCVIKLMARRDRLSAGSRV LILGLTFKENCPDLRNTRVVDIVAELQDYGLACDVHDPWANVAEARREYGIELIFEPPAATYDAIVLAVAHRQFQALGAT AIRAFGRPGAVVYDVKHVLAKEAVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-120 | 62 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-120 | 62 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-102 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thimo_3602 | YP_007245888.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-120 | 62 |
