Gene Information

Name : Thimo_0344 (Thimo_0344)
Accession : YP_007242843.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 378305 - 379432 bp
Length : 1128 bp
Strand : +
Note : PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD

DNA sequence :
GTGACGGACGAGGGCCATGTCTTCATGGCCCGGGCGCTGCGCCTCGCCGAACGCGGCCGCTACACGACCGATCCCAACCC
CCGCGTCGGCTGCGTCCTGGTACGCGACGGCACGGTCGTCGGCGAGGGCTGGCATCAGCGCGCCGGCGGCCCGCACGCCG
AGCGCGTCGCGCTCGCCGAGGCCGGCGGGCGGGCGCGCGGGGCGGTGGCCTTCGTCACCCTCGAGCCCTGCGCCCACCAC
GGCCGGACCCCACCCTGTGCCGACGCCCTGATCGCGGCCGGCGTCGCCCGGGTCGTCGCGGCCATGGTCGATCCCAATCC
GCGGGTTGCCGGCCGCGGCCTTAAGCGCCTGCGCGAGGCCGGCATCGCCGTCGAGGGCGGCCTGCTCGAGGCGCAGGCCG
CGGCGCTCAACCCGGGCTTCATCAAGCGCCAGCGCGAGGGCCTGCCCTTCTGCCGGGTCAAGCTCGCCGCGAGCCTGGAT
GGGCGCACGGCGATGGCGAGCGGCGAGAGCCGTTGGATCACCTCGGAGGCGGCGCGTGCCGACGTGCAGCGCCTGCGGGC
GGGGGCCTCGGCGATCGTCACCGGAAGCGGCACGCTACTCGCCGACGACCCGTCGCTGAATGTGCGCCTCGCGCCTGAAG
CCCTCGGGCTGGCGCCGGGCGAGGCGGTCCGCCAGCCGTTGCGGGTCGTCGTCGACAGCCAGCTGCGCACGCCGCCGACG
GCTGGGTTGCTCGACCTGCCAGGCGTGACCCTGATCGCCTGTACGGTGGAGGAACCTGCGCGGCGCGCGGCGCTGGAGGC
CGCCGGGGCCGAGGTCCTGGTCTGCCCGACGCGGAGGGAAGGACCGCGCGTCGACCTGCACGCCCTGTTCGGTGAACTCG
CCCGGCGCGAGGTCAACGAGGTCCTGATCGAGGCCGGCCCGACGCTCGCCGGGGCTGCGCTCCAGGCGGGGCTGGTCGAC
GAGCTGATCCTCTATCTCGCCCCCCACCTGATGGGCGATGCGGCCCGTGGCCTGTTCCGGCTTCCGGGGCTCGAGCGGAT
GGCCGATCGCGTCGCGCTGGAGATCCTCGACGTCCGCCGGATCGGGCCGGATCTGCGCCTGACAGCGCGCCCGTCGAGCC
GGGGATGA

Protein sequence :
MTDEGHVFMARALRLAERGRYTTDPNPRVGCVLVRDGTVVGEGWHQRAGGPHAERVALAEAGGRARGAVAFVTLEPCAHH
GRTPPCADALIAAGVARVVAAMVDPNPRVAGRGLKRLREAGIAVEGGLLEAQAAALNPGFIKRQREGLPFCRVKLAASLD
GRTAMASGESRWITSEAARADVQRLRAGASAIVTGSGTLLADDPSLNVRLAPEALGLAPGEAVRQPLRVVVDSQLRTPPT
AGLLDLPGVTLIACTVEEPARRAALEAAGAEVLVCPTRREGPRVDLHALFGELARREVNEVLIEAGPTLAGAALQAGLVD
ELILYLAPHLMGDAARGLFRLPGLERMADRVALEILDVRRIGPDLRLTARPSSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-54 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-54 47