Gene Information

Name : Thimo_3279 (Thimo_3279)
Accession : YP_007245587.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Unknown
Product : ATP-dependent carboxylate-amine ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3591158 - 3592492 bp
Length : 1335 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit

DNA sequence :
ATGTCGAATATCACCCCCCAACGCATCGTCGCCGAACTCAACAAACACATCGTCGGTCAGGACGAGGCCAAGCGGGCCGT
CGCCATCGCGCTGCGCAACCGCTGGCGCCGCGCCCAGATCGACGAACCGATGCGCTCGGAGATCACGCCGAAGAACATCC
TGATGATCGGTCCGACCGGCGTCGGCAAGACCGAGATCGCACGCCGCCTGGCGCGACTCGCCAACGCCCCCTTCATCAAG
GTCGAGGCGACCAAGTTCACCGAGGTCGGCTATGTCGGCCGCGACGTCGAGTCGATCATCCGCGACCTGATCGAGAGCGC
GATCAAGATGGTCCGCGAGCAGGAGATGGCCCGGCTCTCCGACACCGCCGAGGCGGCCGCCGAGGAACGCGTCCTAGACA
TCTTGCTGCCTCCCCCATCCAGCTTCGAGCAAGACAGCTTGAGCAAGACGGCCTCGCCGAGCACGCGCGAGAAACTGCGC
GAGCGCCTGCGGGCCGGGGCCCTCGACGAGCGCGAGATCGAGGTCGAGGTAAGCTCCGCGGCCCTCGGCGTCGAGATCAT
GGCCCCACCCGGCATGGAAGAGATGACCAGCCAGCTTCAGAACCTCTTCCAGGACATGGGCCGAGGCCGTACCAAGCGGC
GCAAGCTCAAGATCCGCGACGCAATCAAGTTGCTGCGCGACGAGGAGGCGGCGAAGCGGCTCAACGAGGAAGACATCAAG
CTGCGCGCTGTCGACCTGGTCGAGCAAGCCGGCATCGTCTTCCTTGACGAGATCGACAAGGTGACGCGCCGTACCGAGCA
GACCGGCGGCGCCGATGTGTCGCGCGAAGGCGTGCAGCGCGACCTGCTACCGCTGGTCGAGGGCACGACCGTCTCGACCA
AGTACGGCATGGTGCGCACCGATCACATCCTATTCATCGCCTCGGGGGCCTTCCACCTCGCCAAGCCCTCCGACCTGATC
CCCGAGCTGCAGGGCCGCCTGCCGATCCGCGTCGAACTCAAGGCCCTGACCACCGAGGACTTCGTGCGCATCCTGACCGA
GCCGGATGCCTCGCTGACCGACCAGTATCAAGCCCTGCTCGCGACCGAAGGGGTCGGTCTGGAGTTCACCGACGACGGCC
TCGAGCGCATCGCCGAAGTCGCCTGGCAGGTCAACGAGCGCACCGAAAACATCGGCGCGCGCCGCCTGCACACGGTGATG
GAACGGCTCCTGGAGGACGTCTCCTTCAACGCCGCCGAGCTCGACCGTGTGACCGTCACGGTGACGGCCGCCTACGTGGA
CCAGAACCTCTCCGAGCTCGCAGCCGACGAAGACCTTTCGCGCTACATCCTCTAA

Protein sequence :
MSNITPQRIVAELNKHIVGQDEAKRAVAIALRNRWRRAQIDEPMRSEITPKNILMIGPTGVGKTEIARRLARLANAPFIK
VEATKFTEVGYVGRDVESIIRDLIESAIKMVREQEMARLSDTAEAAAEERVLDILLPPPSSFEQDSLSKTASPSTREKLR
ERLRAGALDEREIEVEVSSAALGVEIMAPPGMEEMTSQLQNLFQDMGRGRTKRRKLKIRDAIKLLRDEEAAKRLNEEDIK
LRAVDLVEQAGIVFLDEIDKVTRRTEQTGGADVSREGVQRDLLPLVEGTTVSTKYGMVRTDHILFIASGAFHLAKPSDLI
PELQGRLPIRVELKALTTEDFVRILTEPDASLTDQYQALLATEGVGLEFTDDGLERIAEVAWQVNERTENIGARRLHTVM
ERLLEDVSFNAAELDRVTVTVTAAYVDQNLSELAADEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 2e-104 47