Gene Information

Name : Thimo_3113 (Thimo_3113)
Accession : YP_007245427.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3413579 - 3414955 bp
Length : 1377 bp
Strand : -
Note : PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase

DNA sequence :
ATGAAGACGTCACGCGACAAGGCCCCTGAACAGCGCGCTGCGGCGGGGCGTACGCTCGTCGTCGGGCTCGGCAAGACGGG
GCTTTCATGTGCCCGCTTCCTGCATGCCCAGGGTGTGCAGGTCGCCGTCACCGACTCGCGCGAGGCCCCGCCTGGGCTGG
CCGCGCTGCGCGCCGAACTGCCCGATGTGGCGCTCTTTCTCGGGGGCTTCCGCCGCAACGTTTTCGATGCCGCCGATCGC
CTCGTCGTCAGCCCAGGGATATCGACGGCGGTGCCGGAGATCCAGGCGGCTGCGGCCCGCGGGGTGACGGTCATCGGTGA
TATCGAGCTCTTCGCCGGGGCGGTTCGGGCGCCGGTCGTGGCGATCACCGGTTCCAACGGCAAGAGCACCGTGACCACGC
TGGTCGGGCTGATGGCGCGCCAGGCCGGCTGGCGGGCGGCGGTCGGCGGCAACCTCGGTGAGCCGGCACTGGACCTGCTC
GCCGAAGAGGCAAAACTCTATATCTTGGAACTCTCCAGCTTCCAGCTCGAGACGACGGCCACGCTGCGTCCGCGGGTCGG
GGCAGTGCTCAACGTCTCACCCGACCACATGGATCGTTACCCAGACCTCGCCGCCTACGCAGCGGCCAAGCAGCGGATCT
TCGCTGGTGCCGAGGTGGCCGTCGTTAATCTCGAAGATCCGACTGTCGCGGCGATGCCGACCGGGGGCGCGGAGCGGCGA
GGCTTTACGCTGGGGATACCCGAAGAGGGGGTCTTCGGGCTCTGCGATCGGGCCGGCGAACCTTGGCTCTGTCATGGCGC
GACCCCGTGGCTGTCGGCCGGTGAACTGCTCATCCCGGGGCGGCACAATCAGGCGAACGCGCTCGCCGCACTGGCCATCG
GCGCCGCAGTCGGGTTTCCCCGCGAGGCGATGGTCGAGGCGCTTCGCCGCTTTCGCGGGTTGCCGCACCGTAGCGAGCTG
GTTGCCGATCAGGGCGGGCTGCGTTGGTACGACGATTCGAAGGGGACCAACCCCGGGGCGACGGTCGCCGCCCTCGACGG
TCTGGCCCCGTCCGGCTGCGGCTATAAGGTCGTCCTGATCGCCGGTGGCGACGGCAAGGGCGCCGACTTCGCGCCGCTGG
CGCCGGTCGTCGCGCGGGCGGCCCGCGCCCTGGTGCTCATCGGCCGCGATGCGCCGCGGCTCGCCGAGGTCCTCGGGGGC
CGGGTGCCGATTCAGAACGCTGACGATATGGACGACGCGGTGCGCCAGGCGGCCGCGCTGGCCGAGCCGGGCGATAGCGT
GCTGCTCTCACCGGCTTGCGCGAGCTTCGATATGTTCGAGGACTACGAGGATCGCGGCCGCGTCTTCGCCGCCGCGGTGA
GGAGGCTGTACGGATGA

Protein sequence :
MKTSRDKAPEQRAAAGRTLVVGLGKTGLSCARFLHAQGVQVAVTDSREAPPGLAALRAELPDVALFLGGFRRNVFDAADR
LVVSPGISTAVPEIQAAAARGVTVIGDIELFAGAVRAPVVAITGSNGKSTVTTLVGLMARQAGWRAAVGGNLGEPALDLL
AEEAKLYILELSSFQLETTATLRPRVGAVLNVSPDHMDRYPDLAAYAAAKQRIFAGAEVAVVNLEDPTVAAMPTGGAERR
GFTLGIPEEGVFGLCDRAGEPWLCHGATPWLSAGELLIPGRHNQANALAALAIGAAVGFPREAMVEALRRFRGLPHRSEL
VADQGGLRWYDDSKGTNPGATVAALDGLAPSGCGYKVVLIAGGDGKGADFAPLAPVVARAARALVLIGRDAPRLAEVLGG
RVPIQNADDMDDAVRQAAALAEPGDSVLLSPACASFDMFEDYEDRGRVFAAAVRRLYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-80 48
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-80 48