Gene Information

Name : Thimo_0301 (Thimo_0301)
Accession : YP_007242801.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 325759 - 326448 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGCTCTCCATCGACAATCTGACGAAGCGCTTCGCCTCGTCGGCCGACCGCCCACTGTTCGAGAATCTGTCCCTGACCCT
CGCGCCCGGCGAGTCGGTTGCGATCATGGGCGAGTCGGGCGTCGGCAAGTCGACGCTGCTCAACTGCATCGCCGGGCTGG
AGCCGGTCGACGCGGGCCGCATCCGCCTCGGCGAGACGGAGCTGACGGCCCTCGACGAGGACGCCTTCGCGGGCCTGCGC
CGCCGTGCGCTGGGCTTCGTCTTCCAGGCCTTCCACATCCTGCCGCACCTGACCTTGGCGCAGAACGTCGCGCTGCCGCT
GTGGCTGCTCGACGTCGGCGATGCCGAAGCGGATCGGCAGGCACGGGCGATGCTCGCGCGGGTCGGTCTGGAGGCGCGCG
CCGAGGACTGGCCGCGCCACCTCTCCGGCGGCGAGCTCCAGCGCGTCGCGATCGCCCGGGCGCTGGTCCACGGGCCGGCC
CTGGTGCTCTGCGACGAGCCGACCGGCAATCTCGATCCCGAGCGCGCCGCCGGGGTCCTGGCGCTGCTGTTCGGGAGCCT
GCGCGCCGCCGGCGCCATCGGCATCCTGGTCACCCATTCGCGCGTCGCGGCGGGCTACGCCGACCGGATCCTGCGCCTGA
CCGCCGCCGGCCTGGTCGCGGACTCGGAGCCGGATCCGCAGAACTCATGA

Protein sequence :
MLSIDNLTKRFASSADRPLFENLSLTLAPGESVAIMGESGVGKSTLLNCIAGLEPVDAGRIRLGETELTALDEDAFAGLR
RRALGFVFQAFHILPHLTLAQNVALPLWLLDVGDAEADRQARAMLARVGLEARAEDWPRHLSGGELQRVAIARALVHGPA
LVLCDEPTGNLDPERAAGVLALLFGSLRAAGAIGILVTHSRVAAGYADRILRLTAAGLVADSEPDPQNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_0301 YP_007242801.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-30 50