Gene Information

Name : Thimo_2879 (Thimo_2879)
Accession : YP_007245209.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3161659 - 3162996 bp
Length : 1338 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGAACATCACAATCTTTGGTAGCGGTTACGTCGGTCTCGTCACTGGGGCCTGCCTGGCCGAGGTCGGCAACCATGTCGT
CTGCGTCGACGTCGATCCAGACAAGGTCGCACTGCTCAACGACGGCGGCGTGCCCATCTATGAGCCTGGCCTCGAAGAGT
TGCTGAAGTCGAACCGCGAGGCGGGACGACTCACCTTCACCACAGACGCCGTGGCCGGCGTGAGGCATGGCCTGTTTCAG
TTCATCGCCGTCGGCACCCCGCCGGACGAGGACGGCTCGGCCGACCTCCAGCATGTCCTGGCCGTCGCAAAAACGATAGG
CGAGCAGATGGACGACTACCGCATCATCGTCGACAAATCGACGGTGCCCGTCGGCACCGCCGACCGGGTCGCCGAACAGG
TGCGGACCCACCTCGCCGCACGCGGCGTCGATGTCGAATTCGACGTGGTTTCGAACCCCGAATTCCTCAAGGAAGGGGCC
GCGATCGAGGATTTCATGCGCCCGGACCGCATCGTCGTCGGCACCGACAACCCACGTACCGGCGAGCTGTTGCGCGCCCT
CTACGCCCCCTTCAACCGCAGCCACGATCGGTTGATGCTGATGGACGTGCGCTCGGCGGAGCTGACCAAGTATGCCGCCA
ACGCCATCCTGGCGACGAAGATCAGCTTCATGAACGAGCTCTCCAACATCGCCGAGGCCCTCGGCGCCGACATCGAGCGC
GTGCGCGTCGGCATCGGCTCGGATCCCCGCATCGGCTACCAGTTCATCTATCCGGGCTGCGGCTACGGGGGGTCGTGCTT
TCCGAAGGATGTCCGCGCCCTGATCCACTCGGCGCGCTCGATCGGCTACGACGCCGAGCTCTTATCCGCCGTCGAGGCGG
TCAACGACCGCCAAAAGGACGTCCTGTTCAAGAAGATCGACGAGTACTTCGGGGGACAACTCGCCGGCCGCACCGTCGGC
CTCTGGGGCCTGTCTTTCAAGCCCAACACCGACGACATGCGCGAGGCCTCCAGCCGACGGCTGATGGAGGCCCTTTGGCA
AGCGGGCGCCCGGGTGCAGGCCTTCGATCCGGTCGCGATGGACGAGGCCCGGCGACTCTACGGCGAGCGTCCCGACCTGA
CGCTGACGCCGGATGCGCTGGCCGCCGCCGACGGCGCCGACGCCCTCGCGATCGTGACCGAATGGACCCAGTTCCGCAGC
CCCGATTTCGGCCAGATCCGCCAGCTCCTTAAGGAGCCAGTCGTCTTCGACGGGCGCAACGTCTTTGATTCCAGGCAGGC
GATCACCGCCGGCCTGACCTACTTCTCGATCGGCCGCACCGCCCGCAGACCAGACTGA

Protein sequence :
MNITIFGSGYVGLVTGACLAEVGNHVVCVDVDPDKVALLNDGGVPIYEPGLEELLKSNREAGRLTFTTDAVAGVRHGLFQ
FIAVGTPPDEDGSADLQHVLAVAKTIGEQMDDYRIIVDKSTVPVGTADRVAEQVRTHLAARGVDVEFDVVSNPEFLKEGA
AIEDFMRPDRIVVGTDNPRTGELLRALYAPFNRSHDRLMLMDVRSAELTKYAANAILATKISFMNELSNIAEALGADIER
VRVGIGSDPRIGYQFIYPGCGYGGSCFPKDVRALIHSARSIGYDAELLSAVEAVNDRQKDVLFKKIDEYFGGQLAGRTVG
LWGLSFKPNTDDMREASSRRLMEALWQAGARVQAFDPVAMDEARRLYGERPDLTLTPDALAAADGADALAIVTEWTQFRS
PDFGQIRQLLKEPVVFDGRNVFDSRQAITAGLTYFSIGRTARRPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-50 41
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-50 41
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 2e-50 41