Gene Information

Name : Thimo_2191 (Thimo_2191)
Accession : YP_007244569.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2434339 - 2435685 bp
Length : 1347 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain

DNA sequence :
ATGACGAAAGCACACGCCCTCGTCGTCGACGACGAGCCGGACATCCTCGACCTGATCCGTATCACGCTCGCGCGGATGGG
CATCCAGGCGCAGACCGCAGCGAACCTCAAGGAAGCCAAACAGCTGCTCACGACCCAGCCATTCGATCTGTGCCTGACCG
ACATGCAGTTGCCCGACGGCAACGGCATCGAACTGGTCGCTCACATCAGCGAGGCCTATCCCGACCTGCCCGCGGCGATG
ATCACCGCCCACGGCAACATGGAATCCGCCGTTGCGGCAATGAAGGCCGGCGCCTTCGATTTCGTCTCCAAGCCGGTCGA
CCTCCAGATGCTGCGCCGTCTCGTCGAGTCGGCCTTGCGGTTGCGCGATGCAGGCCCGACCGACGAAGCGGACAGCCAAA
TCTCCGGGCAGCTGCTCGGCAACTCCCGGCCGATGCGCGAAATCCGCCGCATGATCGGCAAGATCGCGCGCAACCAGGCC
CCCGTATTCATCACCGGTGAGAGCGGCACCGGCAAGGAGGTTGCGGCACGTCTGATCCATGCCGAAGGGCCGCGCCGAGA
CGGCCCCTTCGTGCCGGTCAACTGTGGCGCGATTCCCCAGGAACTCGTCGAGAGCGAACTGTTCGGCCACAAGAAGGGCA
GCTTCACCGGGGCCGTTGGCGACAAGCAGGGACTGTTCCAGGCCGCCGAGGTGGGCACCCTCTTCCTCGACGAGGTCGCC
GACCTGCCGCTGCAAGCCCAGGTGAAGCTTCTGCGCGCGATCCAGGAAAAGAGCGTGCGTCCCGTCGGCGCCCAACAGGA
GCTGCCAGTCGACGTGCGCATCATCAGCGCCAGCCACCGGGACCTGAACGCGGAAGTCGACCATGGCTCGTTCCGCCAGG
ATCTCTTCTATCGGATCAACGTCATCGAACTGCGAATGCCGGCCCTGCGCGAGCGGCCGGAGGACATCCCGCTGCTCGCT
ACCCGCATCCTGACCCGCATCGCCAAACAGACCGGGCGGGACGACCTCAAGCTCAGCGACGGCGCCCTGCGGAAGCTCGC
CGGCCACCGCTTCCCCGGCAATGTGCGCGAGCTCGAGAACATCCTCGAGCGCGGTGCCGCGCTCTGCGACGGCAACCTGA
TCGGCGCCGATGAGATCTACCTGCCGCAGAACCCGGCGCCTACGCCAACGGCGACCAGCCCCGCACAAACGGATCTGCCG
CTCGAAGACTATCTCGGCGAGATCGAGAAGAAGGCGATCCTGCAAGCCCTAGAGGAGACCCGCTGGAACCGGACCGCGGC
GGCCAAAAAGCTCGGCATGACGCTGCGTTCGCTGCGCTACCGGTTGAACAAGCTCGGCCTGGACTGA

Protein sequence :
MTKAHALVVDDEPDILDLIRITLARMGIQAQTAANLKEAKQLLTTQPFDLCLTDMQLPDGNGIELVAHISEAYPDLPAAM
ITAHGNMESAVAAMKAGAFDFVSKPVDLQMLRRLVESALRLRDAGPTDEADSQISGQLLGNSRPMREIRRMIGKIARNQA
PVFITGESGTGKEVAARLIHAEGPRRDGPFVPVNCGAIPQELVESELFGHKKGSFTGAVGDKQGLFQAAEVGTLFLDEVA
DLPLQAQVKLLRAIQEKSVRPVGAQQELPVDVRIISASHRDLNAEVDHGSFRQDLFYRINVIELRMPALRERPEDIPLLA
TRILTRIAKQTGRDDLKLSDGALRKLAGHRFPGNVRELENILERGAALCDGNLIGADEIYLPQNPAPTPTATSPAQTDLP
LEDYLGEIEKKAILQALEETRWNRTAAAKKLGMTLRSLRYRLNKLGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-108 53
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-108 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2191 YP_007244569.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0089 Protein 3e-73 44
Thimo_2191 YP_007244569.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 1e-67 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2191 YP_007244569.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 2e-138 62
Thimo_2191 YP_007244569.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 2e-62 41