Gene Information

Name : Thimo_2146 (Thimo_2146)
Accession : YP_007244527.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2372672 - 2373388 bp
Length : 717 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGGCTCGCAAATCCCGCCTCTTGATCATCGAAGACGAAGAGCCGATCCGGACCGGCTTGGAGGACCTCTTCGTGTTCCA
CGGCTTCGACGTCGAGAGCGCGGCCGACGGACCGACCGGTCTCGCCAAGGCATTGACGGGCGCGTTCGACCTGATCCTGC
TCGACATCATGCTTCCCGGGCTCGACGGCTTCGCCATCTGCGACCGCATCCGAGCCCGGGACCGGAGCCAACCGGTCATC
ATGCTGACCGCCCGCACGGCGGATGCGGACATCGTCCAGGGGCTGCGGTCCGGTGCGGACGACTATGTCTCCAAGCCCTT
CTCGGTGACCGAGTTGGTGCTGCGCGTTCAGGCCGTACTGCGACGAAGCGGTGGCCTGGACGCGGATCAGGACCAGCTCA
TGCTCGGCGACCTGGAGCTGGATACGCGTAATCTCAGCGGTCGTCGCGGTGGGCTGGAGATTCCCTTCACCCAGCGCGAG
GTGGACATCCTCAAGTACCTCGCCGCCAACGGCGAGCGTCCGGTCTCGCGCGAGGAGTTGCTGAACAAGGTCTGGGGTTA
CGCCCGGGACTGTGGCCTGGAGACGCGGACCGTGGATATCCACATCGCCAAGCTCAGGCGCAAGATCGAGACCGAGCCCG
GCGAGCCCAAGGTCCTCGTCACGGTGCGCGGCGTGGGGTATCGGCTGATGATCGGGTCTTGGGACAAGGGTCATTAG

Protein sequence : 
MARKSRLLIIEDEEPIRTGLEDLFVFHGFDVESAADGPTGLAKALTGAFDLILLDIMLPGLDGFAICDRIRARDRSQPVI
MLTARTADADIVQGLRSGADDYVSKPFSVTELVLRVQAVLRRSGGLDADQDQLMLGDLELDTRNLSGRRGGLEIPFTQRE
VDILKYLAANGERPVSREELLNKVWGYARDCGLETRTVDIHIAKLRRKIETEPGEPKVLVTVRGVGYRLMIGSWDKGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-29 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2146 YP_007244527.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-29 42
Thimo_2146 YP_007244527.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 7e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2146 YP_007244527.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 7e-32 43
Thimo_2146 YP_007244527.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 4e-29 42