Gene Information

Name : Thimo_1479 (Thimo_1479)
Accession : YP_007243899.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1631869 - 1632765 bp
Length : 897 bp
Strand : +
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGAGCGACGAACTGGTCGTCATCGAGGGCTTCGCCGACGCCCTCTGGATGGAGCGTGGCCTCAGCCATAACACGCTAAG
TGCCTATCAGTCGGACCTGCGCCGTTTCGCCGCTTGGCTCGCCTGCGAACGCGGTCGCAGGCTCACGGAAGCCGGGCGTG
GCGATCTGCTGGACTATCTGCACGCCCTTTCGCTCGCCGGTCGCAAGCCACGCTCGGCGGCGCGCAGCCTGTCTTGTCTA
CGCCAATTTTATCAGCACCTAGTGCGCCAGGGTGTCATCGAGGTGGACCCCTGTGCCCGCATCGATGCCCCAAGGCTTGG
TCGCCCGCTGCCGCGGACCCTGACGGAGTCCGAGGTCGAGGCGCTGCTCGATGCCCCCGACAGCGATGACCCGCGCGGCC
ATCGCGACCGGACCATGCTGGAGGTGCTCTACGCGAGCGGGTTGCGCGTCTCGGAGCTGGTTCGGCTGACGCCGCAGCAG
GTGAGTTTGACCCAGGGCGTCGTGCGCATCGTCGGCAAGGGTGACAAGGAGCGTCTGGTGCCGCTCGGCGAGGAGGCCGC
CGGTTGGCTGCGCGAATACGCGCAGGGCCCGCGGCACGACATCCTCGGCGGGCGCCGTAGCGACTATCTGTTCCCGACCG
GGCGTAGCGAGTGCATGACGCGGCAGGCCTTCTGGCTCCTGATCAAGCGGTATGCGCTGGTCGCCGGTATCGGCAAGCCG
CTCTCGCCGCACACGCTGCGCCACGCCTTCGCGACCCATCTGCTCAACCACGGGGCCGACCTGAGAGTCGTGCAGATGCT
GTTGGGACACAGCAGCCTCTCGACGACGCAGATCTACACGCACGTCGCACGTGAGCGGCTCAAGCAGATCCATGCCCGGC
ACCATCCCCGTGCCTGA

Protein sequence :
MSDELVVIEGFADALWMERGLSHNTLSAYQSDLRRFAAWLACERGRRLTEAGRGDLLDYLHALSLAGRKPRSAARSLSCL
RQFYQHLVRQGVIEVDPCARIDAPRLGRPLPRTLTESEVEALLDAPDSDDPRGHRDRTMLEVLYASGLRVSELVRLTPQQ
VSLTQGVVRIVGKGDKERLVPLGEEAAGWLREYAQGPRHDILGGRRSDYLFPTGRSECMTRQAFWLLIKRYALVAGIGKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSSLSTTQIYTHVARERLKQIHARHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-64 52
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-64 52