Gene Information

Name : Thimo_1432 (Thimo_1432)
Accession : YP_007243853.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1566101 - 1566799 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATCGAGCTCGAGGGCATCCAGCGCATATTCAAGGTTGGCGACGAGGAGGTCGCCGCGCTTAGCAAGCTTGACCTCAG
GTTCGAGACCGGTGCCTATGCCGCCATCATGGGCCCGTCCGGCTCAGGGAAATCCACTTTGCTCAATATCTTGGGCCTTC
TCGACCGCCCTGATGCCGGCGTCTACCGACTTGATGGCATACCCACAACGGACCTTTCCGACAACGAACAGGCCGAGATT
CGGGGCCACAAGATCGGCTTCGTCTTCCAGTCCTTTCATCTGATCCCGCGATTGACCGCAGCAGAGAACGTCCAGTTGCC
GCTGATGCTGGCCGGCGTTGCACCAGACGAACGAAAACGTATCGTGTCCGAAACTCTCGAATCGATGGGCTTGACGGACC
GCGCCCACCATCGACCCGATCAGCTCTCAGGAGGCCAGCGACAGCGCGTCGCAATTGCCCGCGCAGTGATCATGCAGCCG
TCGATCATTCTAGCCGACGAACCCACCGGCAATCTTGATCATGCTAGCGGCGCCTCGGTCATCGAGATACTAGAGTCGCT
CAATCGCCAGGGAATCACGCTGCTGATCGTCACCCACGACCCCGAGGTCGGGAAACGGGCGCAGCGCCAGGTCCATCTCC
TCGACGGCAAGGTCGTCTTCGACGGCGCCCCGGCGGAACATCACCAACTGCCCGTCTAG

Protein sequence :
MIELEGIQRIFKVGDEEVAALSKLDLRFETGAYAAIMGPSGSGKSTLLNILGLLDRPDAGVYRLDGIPTTDLSDNEQAEI
RGHKIGFVFQSFHLIPRLTAAENVQLPLMLAGVAPDERKRIVSETLESMGLTDRAHHRPDQLSGGQRQRVAIARAVIMQP
SIILADEPTGNLDHASGASVIEILESLNRQGITLLIVTHDPEVGKRAQRQVHLLDGKVVFDGAPAEHHQLPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_1432 YP_007243853.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 8e-62 65
Thimo_1432 YP_007243853.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 6e-53 48
Thimo_1432 YP_007243853.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686946. Protein 7e-31 42
Thimo_1432 YP_007243853.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-36 42
Thimo_1432 YP_007243853.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-36 41