Gene Information

Name : Psest_0957 (Psest_0957)
Accession : YP_007239165.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1039260 - 1039742 bp
Length : 483 bp
Strand : -
Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence :
ATGGCCAAACAGAAGAAACAGTCCCCCGGGACCATCGCGCTGAACAAGAAAGCGCTACACGATTACTTCATCGAACAGAA
ATTCGAGGCAGGCCTCGTCCTGGCCGGCTGGGAAGTGAAGAGCATGCGTGCCGGCAAGGCACAGCTGGTGGACAGCTACG
TCCTGCTCAAGGATGGCGAAGCCTGGTTGATGGGCGCGCACATCACGCCGCTGACCAGCGCCAGCACCCACGTCATCGCC
GACCCGACCCGCACCCGCAAGCTGCTATTGAACAAGCGCGAGCTGGGCAAGCTGTTCGGTGCCGTGCAGCAGAAGGGCTA
CGCCTGCGTGGCGCTTTCGCTGTACTGGAAGAAGCACATGATCAAGTGCGAGATCGCCCTCGGCAAAGGCAAAAAGGAGT
ACGACAAGCGCCACACCGAGAAGGAGCGTGATTCCGATCGCGAGATCCAGCGCGCCATGCGCACCAAGGGCAAAGACGAC
TGA

Protein sequence :
MAKQKKQSPGTIALNKKALHDYFIEQKFEAGLVLAGWEVKSMRAGKAQLVDSYVLLKDGEAWLMGAHITPLTSASTHVIA
DPTRTRKLLLNKRELGKLFGAVQQKGYACVALSLYWKKHMIKCEIALGKGKKEYDKRHTEKERDSDREIQRAMRTKGKDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-36 54
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-24 46
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 6e-27 45