Gene Information

Name : Psest_0905 (Psest_0905)
Accession : YP_007239119.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.99.3
Position : 982931 - 984430 bp
Length : 1500 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGAAAGATTCCAGCGATACCCATCCGAATCACCTTCCCGACAGCAGCTACGGCCTGTTTATTGACAACCAGTGGGTTTC
GGACGAATACGGTGAAACCCTCGACATTATCAACCCCGCCAACGGAAAAATTCTCACCAACATCCCAAACGCCACAGCTG
CCGACGTCGACCGCGCGGTGCAGGCCGCACAGCGCGCCTTCATGACCTGGCGTACCACCTCACCTGCGGAACGCGCCAAT
GCGTTGTTGAAGATCGCCGACCTGCTGGAAGCCGATGCCGATCGGTTCGCCGTTCTGGAAACCCTTGATGTAGGTAAACC
CATTCGTGAAAGTCGCTCCGTCGACATCCCGCTGGCAATTGATCACTTCCGCTACTTCGCCGGCGTAATCCGCAGCCAAT
CGGATGAGGCGGTCATGCTGGATGAGCAAACACTCAGCATCGCTCTCAGTGAACCCCTCGGAGTTGTGGGCCAAGTGATT
CCGTGGAACTTCCCGCTGCTTATGGCCGCCTGGAAGATCGCTCCGGCCATCGCAGCGGGTAACACCGTAGTCATCAAACC
TTCCGAGCTGACCCCGGTAACCATCCTCGAACTGGCGAAGATCTTCGCTAAGGTACTTCCAGCCGGCGTGGTCAACATCG
TCACAGGCTTAGGCACCACAGTTGGGCAGGCGTTACTGGATCATCCGGACCTGCGCAAGCTTGCCTTTACCGGCTCGACG
CGTGTCGGCGAACTCGTCGCCAATGCGGCAGCGAAGAAAATCATTCCCGCCACCCTTGAACTGGGCGGCAAGTCGGCCAA
CATCGTTTTCCCCGATGCGAACTGGGACAAGGCCGTGGAAGGCGCAGTCCTCGCCATCCTGTGGAACCAAGGCCAAGTCT
GCGAATCCGGCGCACGGCTGTTCGTTCACGAATCCATCTACGAACGATTCCTAGCTGAGCTCAAGCATAAGTTCGAAGCT
GTACGTGTGGGTGACCCACTGAACCCGGACACCATGATGGGTGCACAGGTCAGCAAGTCCCAGATGGAACGGATCCTCGG
CTACGTCGATATCGCCAAACAGGAAGGCGCTGAGGTACTGATCGGCGGCGGTCGTCTCACAGGTGCCAATTACGATGCCG
GCTTCTTCATCCAGCCAACGATTCTGGTCGGTGTTCGCAACGATATGCGCGTCGCCTACGAGGAAATTTTCGGCCCTGTT
CTGTGCGTCATTCCTTTCAAGGATGAAGCGGAGGTCATCGCCATGGCCAACGACTCCGAGTACGGCCTAGCCGGTGCAGT
CTGGACCCAAGACATCAACCGGGCGTTACGTGTGGCACGCGCGGTGGAAACCGGACGTATGTGGGTAAATACCTACCATG
AGATCCCTGCCCATGCCCCCTTTGGTGGCTATAAGAAATCTGGCCTAGGACGGGAAACTCACAAGTCAATGCTGGAAGCC
TACAGCCAGAAGAAGAACATCTACGTCAGCCTCAACGAAGCACCGCTCGGGCTCTTCTGA

Protein sequence :
MKDSSDTHPNHLPDSSYGLFIDNQWVSDEYGETLDIINPANGKILTNIPNATAADVDRAVQAAQRAFMTWRTTSPAERAN
ALLKIADLLEADADRFAVLETLDVGKPIRESRSVDIPLAIDHFRYFAGVIRSQSDEAVMLDEQTLSIALSEPLGVVGQVI
PWNFPLLMAAWKIAPAIAAGNTVVIKPSELTPVTILELAKIFAKVLPAGVVNIVTGLGTTVGQALLDHPDLRKLAFTGST
RVGELVANAAAKKIIPATLELGGKSANIVFPDANWDKAVEGAVLAILWNQGQVCESGARLFVHESIYERFLAELKHKFEA
VRVGDPLNPDTMMGAQVSKSQMERILGYVDIAKQEGAEVLIGGGRLTGANYDAGFFIQPTILVGVRNDMRVAYEEIFGPV
LCVIPFKDEAEVIAMANDSEYGLAGAVWTQDINRALRVARAVETGRMWVNTYHEIPAHAPFGGYKKSGLGRETHKSMLEA
YSQKKNIYVSLNEAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-106 52
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-110 51
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-110 51
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-110 51
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-109 51
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 1e-67 50
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 1e-67 50
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 1e-67 50
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 1e-67 50
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 1e-67 50
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 6e-68 50
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 2e-67 50
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 2e-67 50
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-73 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0905 YP_007239119.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 1e-106 52