Gene Information

Name : Psest_0705 (Psest_0705)
Accession : YP_007238931.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 773884 - 775278 bp
Length : 1395 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain

DNA sequence :
ATGCTCGCCTGCCGCATTCGCGGCGACACCCGCTTCACGAATTTCAAGAGCAGGACCATGACCGCGCGCCAAAAAGCACT
GATCATCGACGACGAGCCGGATATTCGCGAGCTGTTGGAAATCACCCTCGGCCGCATGAAGCTCGACACCCGCAGCGCGC
GCAATCTCAAGGAAGCGCGCGAACTGCTGGCCCGCGAGCATTACGACCTGTGCCTGACCGACATGCGCCTGCCTGACGGT
AGCGGCCTGGAACTGGTGCAATACATCCAGCAGCAGCACCCGCAACTGCCGGTGGCGATGATCACCGCCTACGGCAGCCT
GGACACCGCGATCGGCGCACTCAAGGCCGGTGCGTTCGACTTTCTCACCAAACCGGTGGACCTCAATCGCTTGCGCGAAC
TGGTCAGCACTGCCCTGCGCCTGCGTGCGCCGGCCACGGAGGCGCCGGTAGACAGCCGGCTGCTGGGCGGCTCACCGCCG
ATGAAGGTCTTGCGCAAGCAGATCGGCAAGCTCGCGCGCAGTCAGGCGCCGGTGTATATCAGCGGCGAATCCGGCAGCGG
CAAGGAGCTGGTGGCCCGCCTGATCCACGAACAAGGGCCACGCGCCGAAAAAACCTTCGTGCCGGTCAACTGCGGGGCGA
TTCCTTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGTTTCAGTGGCGCCATCGAGGACAAGCCGGGC
CTGTTCCAGGCCGCCAGTGGCGGCACCCTCTTTCTCGATGAGGTGGCGGATCTGCCACTGCCGATGCAGGTCAAGCTGCT
GCGCGCCATTCAGGAGAAAGCCGTTCGTGCGGTCGGTGGCGCGCAAGAAGTCATGGTCGATGTGCGCATCCTCTGTGCGA
CTCACAAGGACCTGGCCGCCGAGGTCGCGGCGGGCCGCTTCCGCCAGGATCTGTACTACCGCCTGAACGTGATCGAGCTG
CGCGTACCGCCGCTACGCGAGCGCCGCGAGGACATCCGCCTGCTTGCCGATGCCATGCTCCGGCGCCTGGCCCAGGAATG
CGGCGACAGCATCGCCCATCTTCATCCTGAGGCCCTGGCCAAGCTGGAAAGCTACCGTTTCCCAGGCAACGTGCGCGAAC
TGGAGAACATGCTCGAGCGCGCCTATACGCTCTGCGATGGGGAGGAGATCAAGGCCGGGGACTTGCGCCTCGCCGACAGC
CCCGGCTCGTCGGAGAACGGCGAGGCCAGCCTGGCGCAAATCGACAATCTGGAAGATCACCTGGAAGAGATCGAGCGCAA
GCTGATCATGCAGGCTCTCGAAGAAACGCGCTGGAACCGCACAGCGGCAGCCCAGCGACTCGGCCTGACCTTCCGCTCGA
TGCGTTATCGCTTGAAAAAACTCGGCCTGGATTGA

Protein sequence :
MLACRIRGDTRFTNFKSRTMTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDG
SGLELVQYIQQQHPQLPVAMITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPATEAPVDSRLLGGSPP
MKVLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQGPRAEKTFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPG
LFQAASGGTLFLDEVADLPLPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIEL
RVPPLRERREDIRLLADAMLRRLAQECGDSIAHLHPEALAKLESYRFPGNVRELENMLERAYTLCDGEEIKAGDLRLADS
PGSSENGEASLAQIDNLEDHLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-95 49
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-95 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0705 YP_007238931.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 2e-66 44
Psest_0705 YP_007238931.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0089 Protein 5e-70 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0705 YP_007238931.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 1e-170 86
Psest_0705 YP_007238931.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 3e-50 42