Gene Information

Name : Psest_0671 (Psest_0671)
Accession : YP_007238899.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 731821 - 733341 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGATCTACGCCCCTCCCGGCACCGCCGGTGCCCTCGTTACCCTCAAGGCCCGCTACGGCAACTTCATCAATGGCGAGTT
TGTCGAGCCAGTCAACGGGCAGTATTTCACCAACCTCTCTCCGGTTAACGGCCAGCCGATTGCCGAATTTCCGCGCTCCG
ACGCCGCCGATATCGAGAAAGCCCTGGACGCCGCCCATGCAGCGGCCGACGCCTGGGGCAAGACCAGCGTGCAGGCGCGC
TCGCTGATCCTGCTGCAGATCGCCGATCGCATCGAGCAGAACCTGGAGATGCTCGCCGTCACCGAAACCTGGGACAACGG
CAAGGCGGTGCGCGAAACGCTGAACGCCGATATCCCGCTGGCCGCTGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAGGGCACCAGCGCCGAAATCGACGAGCACACTGCGGCCTATCACTTCCACGAACCACTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAACTGGCTCCGGCCCTGGCTGCTGGTAACTGCGTAGTGCT
GAAACCGGCCGAGCAGACACCGCTGGGTATCACGGTACTGATGGAGGTCATCGGCGACCTGCTGCCACCGGGCGTGCTCA
ACGTGGTGCAAGGCTACGGTCGTGAGGCCGGCGAGGCCCTGGCCAGCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACACCGGTGGGCTCGCACATCATGAAGCGCGCCGCCGAGGCCATCATCCCGAGCACCGTCGAGCTGGGCGGCAAGAG
CCCGAACATCTACTTCGAAGACATCATGCAGGCCGAGCCGACCTTCATCGAGAAGGCCGCCGAAGGCCTGGTACTGGGCT
TCTTCAACCAGGGCGAAGTGTGCACCTGCCCGTCGCGCGCGCTGGTGCAGGAGTCGATCTATGCACCCTTCATGGAAGCG
GTGATGAAGAAGGTCGCGCAGATCAAGCGTGGCGACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCCAGCCAGCA
GCAGTTCGACAAGATCATGTCCTATCTGGAAATCGCCAAGGGCGAAGGCGCGGAGGTGCTCACCGGCGGCGCAGCGGAGA
AGCTCGAAGGCTCGCTCGCCACCGGCTATTACATCCAGCCGACCCTGCTCAAGGGCACCAACCAGATGCGTGTATTCCAA
GAGGAGATCTTCGGCCCGGTGATCGGCGTCACCACCTTCAAGGATGAAGCCGAAGCCCTGGCGATCGCCAACGACACCGA
GTACGGCCTCGGCGCCGGTGTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGGGCCATCAAGGCCGGCCGCG
TCTGGACCAACTGCTACCACCTCTACCCGGCGCATGCCGCGTTCGGTGGCTACAAGAGGTCCGGCGTCGGGCGCGAAACC
CACAAGATGATCCTCGACAGCTACCAGCAGACCAAGAATCTGCTGATCAGCTACGACATCAATCCGCTGGGCTTCTTCTG
A

Protein sequence :
MIYAPPGTAGALVTLKARYGNFINGEFVEPVNGQYFTNLSPVNGQPIAEFPRSDAADIEKALDAAHAAADAWGKTSVQAR
SLILLQIADRIEQNLEMLAVTETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGTSAEIDEHTAAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLMEVIGDLLPPGVLNVVQGYGREAGEALASSKRIAKIAFTG
STPVGSHIMKRAAEAIIPSTVELGGKSPNIYFEDIMQAEPTFIEKAAEGLVLGFFNQGEVCTCPSRALVQESIYAPFMEA
VMKKVAQIKRGDPLDTETMVGAQASQQQFDKIMSYLEIAKGEGAEVLTGGAAEKLEGSLATGYYIQPTLLKGTNQMRVFQ
EEIFGPVIGVTTFKDEAEALAIANDTEYGLGAGVWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKRSGVGRET
HKMILDSYQQTKNLLISYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-146 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-152 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-151 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0671 YP_007238899.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 1e-146 66