Gene Information

Name : Psest_0611 (Psest_0611)
Accession : YP_007238842.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 660938 - 661612 bp
Length : 675 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence : 
ATGCGCATCCTGGTTGTCGAAGACGAGATCAAAGCTGCGGAATACTTGCAGCAGGGTCTTATCGAATGTGGTTACTTGGT
CGATTGCGTAAGTGATGGCCTCGATGGGTTTCACCTGGCACTGCAGAACGACTATGACATCGTGCTGCTAGATGTGAATC
TGCCAACCATGGATGGGTGGGAGGTTCTCGAACTCATCAGGCGGCGTAAGCAGACACGCGTCATCATGCTGACTGCCAAT
GGCCGCTTAGAGCAAAAAGTCCGCGGCTTGGAATCGGGCGCCGACGACTATCTGGTCAAGCCGTTCCAGTTCCCCGAGCT
GCTTGCCCGTATCCGGACACTGTTGCGGCGAGGCGAGGCAGTCACACTTCCGAGCAACCTGCGTGTAGCCGACCTCGAAC
TGGACCCGGCCCGGCATAGGGCTTACCGGAGCGGTCAGCGTATCGACCTCACCAGCAAAGAATTTGCGTTATTGCATCTG
CTCATGCGCCGGACTGGCGAAGTCCTCACGCGTACGGAAATAACTGCCATGGTGTGGGACATCAATTTCGACTGCGATAC
CAATGTGGTGGATGTTGCGATTCGTCGCCTGCGGATGAAAGTGGACGAACCCTTCGGCGATCGCCTGATACACACCATCC
GGGGTGTGGGCTACGTGCTGGAGGCGCGGCCTTGA

Protein sequence : 
MRILVVEDEIKAAEYLQQGLIECGYLVDCVSDGLDGFHLALQNDYDIVLLDVNLPTMDGWEVLELIRRRKQTRVIMLTAN
GRLEQKVRGLESGADDYLVKPFQFPELLARIRTLLRRGEAVTLPSNLRVADLELDPARHRAYRSGQRIDLTSKEFALLHL
LMRRTGEVLTRTEITAMVWDINFDCDTNVVDVAIRRLRMKVDEPFGDRLIHTIRGVGYVLEARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-56 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-56 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0125 Protein 1e-63 59
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0197 Protein 9e-61 57
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0638 Protein 8e-54 56
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0083 Protein 3e-58 55
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0111 Protein 3e-62 55
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0308 Protein 1e-54 53
Psest_0611 YP_007238842.1 heavy metal response regulator BAC0347 Protein 3e-59 53
Psest_0611 YP_007238842.1 heavy metal response regulator NC_010079.5776364.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_002952.2859858.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_007622.3794948.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_003923.1003417.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_013450.8614146.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_002951.3238224.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_007793.3914065.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator NC_002758.1121390.p0 Protein 5e-34 43
Psest_0611 YP_007238842.1 heavy metal response regulator AE015929.1.gene1106. Protein 1e-29 41
Psest_0611 YP_007238842.1 heavy metal response regulator U82965.2.orf14.gene. Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0611 YP_007238842.1 heavy metal response regulator VFG0596 Protein 6e-57 53
Psest_0611 YP_007238842.1 heavy metal response regulator VFG0473 Protein 3e-28 42
Psest_0611 YP_007238842.1 heavy metal response regulator VFG1390 Protein 6e-35 42
Psest_0611 YP_007238842.1 heavy metal response regulator VFG1389 Protein 2e-34 42