Gene Information

Name : Psest_0581 (Psest_0581)
Accession : YP_007238815.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 631856 - 632536 bp
Length : 681 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence :
ATGAAGCTTCTTGTTGCTGAAGACGAGCCGAAAACAGGCACCTACCTACAGCAGGGGCTTTCAGAGGCAGGCTTCACAGT
CGATAGAGTTGAAAACGGGACCGATGCTGCTCAGCACGCGCTTCATACCACATACGACTTGCTCATCTTAGACGTGATGA
TGCCTGGCCTGGATGGGTGGCAGGTTTTACAGAAAGTCCGCGCTGCTGGTAATGAGGTTCCCGTGCTCTTTCTCACCGCC
CGAGACGGGGTTCAGGATCGAGTAAAGGGATTGGAGTTGGGCGCTGATGATTATCTCATCAAGCCGTTCGCCTTCTCCGA
ATTGCTAGCCAGGATCCGTACGTTGCTTCGCCGCGGCAATAATGTCCCCAACCAAACAATACTCAAACTCCTCGACCTTG
AGGTCGATCTGCTCAGGCGTCGAGTTACGCGATCGGGGAAACGAATAGACCTAACTGCAAAGGAATTCGCACTTCTTGAG
CTATTACTTCGGCGTCGCGGGGAAGTGCTCTCAAAGTCCCTTATCGCCTCCCAAGTATGGGACATGAATTTCGACAGCGA
TACCAATGTGATTGAGGTGGCGGTACGACGGCTGAGAGCAAAAATCGATGATGAGTTCGAACCTAAGCTCATACAAACCG
CGCGTGGGATGGGCTATTTGATCGACGCGCCAGACCCCTAG

Protein sequence :
MKLLVAEDEPKTGTYLQQGLSEAGFTVDRVENGTDAAQHALHTTYDLLILDVMMPGLDGWQVLQKVRAAGNEVPVLFLTA
RDGVQDRVKGLELGADDYLIKPFAFSELLARIRTLLRRGNNVPNQTILKLLDLEVDLLRRRVTRSGKRIDLTAKEFALLE
LLLRRRGEVLSKSLIASQVWDMNFDSDTNVIEVAVRRLRAKIDDEFEPKLIQTARGMGYLIDAPDP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-49 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0638 Protein 3e-73 83
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0083 Protein 2e-73 79
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0308 Protein 2e-58 63
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0111 Protein 5e-61 62
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0197 Protein 4e-57 62
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0125 Protein 6e-54 58
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family BAC0347 Protein 3e-54 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family VFG0596 Protein 4e-50 55
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family VFG1386 Protein 4e-33 44
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family VFG1390 Protein 2e-34 43
Psest_0581 YP_007238815.1 two component heavy metal response transcriptional regulator, winged helix family VFG1389 Protein 2e-29 42