Gene Information

Name : Psest_0557 (Psest_0557)
Accession : YP_007238794.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 611093 - 612793 bp
Length : 1701 bp
Strand : -
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGAAGATTTCCCGCCAAGCCTACGCCGACATGTTCGGCCCCACCGTTGGCGACAAGGTGCGCCTGGCCGACACCGACCT
GTGGATCGAAGTGGAAAAAGACTTCACCACCTATGGTGAAGAGGTGAAGTTCGGCGGCGGCAAGGTCATCCGCGACGGCA
TGGGCCAGAGCCAGCTGTGCGCCGCCGAGGTGGTCGATACCCTGATCACCAACGCGCTGATCCTCGACCACTGGGGCATC
GTCAAGGCGGACGTGGGTTTGAAGGATGGCCGCATCGCCGCCATCGGCAAGGCCGGCAACCCGGATATCCAGCCCGACGT
GACCATCGCCATCGGCGCCAGCACCGAAGTGATCGCCGGCGAAGGCATGATCCTCACTGCCGGCGGCATCGACTCGCACA
TCCATTTCATCTGCCCGCAGCAGATCGAAGAAGCCTTGATGAGCGGCGTCACCACCATGATCGGCGGCGGCACCGGCCCT
GCTACCGGCACCAACGCCACCACGGTGACGCCCGGCCCCTGGCACATGGCGATGATGCTCAAGGCCGCCGACGCCTTCCC
GATGAACATCGGCTTCACCGGCAAGGGCAACGCCTCGCTGCCCGAACCGCTGATCGAGCAAGTCAGGGCCGGCGCCATCG
GCCTCAAGCTGCACGAGGATTGGGGCACCACCCCGGCGGCCATCGACAACTGCCTGTCGGTCGCCGACCAGTACGACGTG
CAGGTGGCGATCCACACCGACACGCTGAACGAATCGGGCTTCGTCGAGACGACCCTCGGCGCGTTCAAGGGCCGCACCAT
CCACACCTACCACACCGAGGGTGCCGGCGGCGGCCACGCGCCGGACATCATCAAGGCCTGCGGCTTCGCCAACGTGCTGC
CGAGCTCGACCAACCCGACGCGGCCGTTCACCCGCAACACCATCGACGAGCACCTGGACATGCTGATGGTCTGCCATCAC
CTCGATCCGAGCATCGCCGAGGACGTGGCCTTTGCCGAGAGCCGTATCCGTCGCGAGACCATCGCCGCCGAGGACATCCT
GCATGATCTCGGCGCGTTCTCGATGATCAGCTCCGATAGCCAGGCCATGGGCCGCGTCGGCGAAGTGATCACCCGCACCT
GGCAGACCGCCGACAAGATGAAGAAGCAGCGCGGCGCTCTACCCGGTGATGGCGCCGGCAACGACAACTTCCGCGCCAAG
CGCTACATCGCCAAATACACCATCAACCCGGCGATCACCCACGGCGTCAGCCACGAGGTGGGCTCGATCGAAGTCGGCAA
ATGGGCCGATCTGGTGCTCTGGCGCCCGGCGTTCTTCGGCGTCAAGCCGACGCTGATCCTCAAAGGCGGTGCGATTGCCG
CCAGCCTGATGGGCGACGCCAATGCCTCGATCCCGACCCCGCAACCGGTGCACTACCGGCCGATGTTCGCCAGCTTTGGC
GGCTCGCTGCATGCATCGAGTTTTACCTTCATCAGCCAGGCCGCCTTCGAAGCCGGCGTGCCGGAGCAGCTGGGCCTGAA
GAAGAAGATCGGCGTGGTAAAGGGCTGCCGCTCGGTGCAGAAGAAAGACCTGATCCACAACGACTACACGCCGGATATTC
AGGTCGATCCGCAGAACTATCAGGTCCGCGCCGACGGCCAGCTGCTCTGGTGCGAACCCGCCGAGGTGCTGCCGATGGCG
CAGCGATACTTCCTGTTCTGA

Protein sequence :
MKISRQAYADMFGPTVGDKVRLADTDLWIEVEKDFTTYGEEVKFGGGKVIRDGMGQSQLCAAEVVDTLITNALILDHWGI
VKADVGLKDGRIAAIGKAGNPDIQPDVTIAIGASTEVIAGEGMILTAGGIDSHIHFICPQQIEEALMSGVTTMIGGGTGP
ATGTNATTVTPGPWHMAMMLKAADAFPMNIGFTGKGNASLPEPLIEQVRAGAIGLKLHEDWGTTPAAIDNCLSVADQYDV
QVAIHTDTLNESGFVETTLGAFKGRTIHTYHTEGAGGGHAPDIIKACGFANVLPSSTNPTRPFTRNTIDEHLDMLMVCHH
LDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPGDGAGNDNFRAK
RYIAKYTINPAITHGVSHEVGSIEVGKWADLVLWRPAFFGVKPTLILKGGAIAASLMGDANASIPTPQPVHYRPMFASFG
GSLHASSFTFISQAAFEAGVPEQLGLKKKIGVVKGCRSVQKKDLIHNDYTPDIQVDPQNYQVRADGQLLWCEPAEVLPMA
QRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 74
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 74
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-159 63
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-159 63
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-159 63
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-159 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_0557 YP_007238794.1 urease VFG0270 Protein 5e-153 65