Gene Information

Name : Psest_4305 (Psest_4305)
Accession : YP_007242404.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4503442 - 4504935 bp
Length : 1494 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGCCCACCCTGACCCTCGCCGACTGGCAACAGCGTGCCCGTGACCTGCACATCGAAGGTCGCGCCTTTATCCAGGGTGA
GTATTGCGCCGCGGCGGACGGCGGCCAGTTCGACTGCATCAGCCCGGTGGACGGGCGCGTGCTGGCGCAGGTCGCCAGCT
GCGAGCAGGCCGATGCCGAGCGCGCCGTGGCCAGCGCCCGTGCCGCATTCGATGCCGGCAGCTGGTCGCGCCTGGCACCG
GCCAAGCGCAAGGCGGTGCTGATTCGCTTCGCCGATCTGCTGGAAGCCAACCGCGAGGAGCTGGCGCTGCTGGAAACCCT
CGACATGGGCAAGCCGATCGGCGATTCGCTGGCGGTCGACATCCCCGGCGCCGCGCGGGCGCTGCGCTGGAGTGGCGAGG
CGATCGACAAGATCTACGACGAGGTGGCGGCCACGCCGCATGACCAGCTGGGCCTGGTCACCCGCGAGCCGGTCGGCGTG
GTGGCGGCCATAGTGCCGTGGAACTTCCCGCTGATGATGGCCTGCTGGAAGCTCGGCCCGGCACTGGCCACCGGCAACTC
GGTGGTGCTAAAGCCATCCGAGAAGTCCCCGCTGACCGCCATCCGCATCGCCCAGCTGGCGATCGACGCCGGCATTCCGG
CCGGCGTGCTTAACGTGCTGCCGGGCTACGGCCATACCGTCGGCAAGGCGCTGGCGCTGCACATGGATGTCGATACCCTG
GTCTTCACCGGCTCCACCCGGGTCGCCAAGCAGCTGATGATCTATGCCGGCGAATCGAACATGAAGCGCGTCTGGCTGGA
AGCGGGCGGCAAGAGCCCGAACATCGTCTTCGCCGACGCGCCCGACCTGCAGGCCGCAGCGCAAGCCGCGGCTGGCGCCA
TCGCCTTTAACCAGGGCGAGGTCTGCACCGCCGGCTCGCGGCTGCTGGTGGAGCGATCGATCAGGGAGCGCTTCCTGCCC
ATGGTGGTCGAGGCGCTCAAAGGCTGGAAACCGGGCAATCCACTGGACCCGGCGACCAACGTCGGCGCGCTGGTGGATAC
CCAGCAGCTGAATACCGTGCTTGGCTACATCGACGCCGGGCGTCAGGCCGGCGCGCAGGTGCTGATCGGCGGCCAGCGTA
CGCTGGAGGAAACCGGCGGGCTGTATGTCGAGCCGACCATCTTCGATGGCGTCGACAATGCGATGAGGATCGCCCAGGAA
GAAATCTTCGGCCCGGTGCTGTCGGTGATCACCTTCGACAGCGCCGAGGAAGCAGTGGCGATCGCCAACGACACGCCCTA
CGGCCTGGCCGCGGCCGTGTGGACCGCCGACCTGTCCAAGGCACACCGCACCGCGCGGGCGCTGCGCGCTGGCAGCGTGT
GGGTCAATCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGCGGCTTCAAGCAGTCCGGCAACGGCCGCGACAAGTCG
CTGCACGCCTTCGACAAGTACACCGAGCTGAAGGCGACCTGGATTCAGCTCTGA

Protein sequence :
MPTLTLADWQQRARDLHIEGRAFIQGEYCAAADGGQFDCISPVDGRVLAQVASCEQADAERAVASARAAFDAGSWSRLAP
AKRKAVLIRFADLLEANREELALLETLDMGKPIGDSLAVDIPGAARALRWSGEAIDKIYDEVAATPHDQLGLVTREPVGV
VAAIVPWNFPLMMACWKLGPALATGNSVVLKPSEKSPLTAIRIAQLAIDAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTRVAKQLMIYAGESNMKRVWLEAGGKSPNIVFADAPDLQAAAQAAAGAIAFNQGEVCTAGSRLLVERSIRERFLP
MVVEALKGWKPGNPLDPATNVGALVDTQQLNTVLGYIDAGRQAGAQVLIGGQRTLEETGGLYVEPTIFDGVDNAMRIAQE
EIFGPVLSVITFDSAEEAVAIANDTPYGLAAAVWTADLSKAHRTARALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-117 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-70 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-70 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-70 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-70 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-70 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psest_4305 YP_007242404.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-70 43