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Name : Psest_4202 (Psest_4202) Accession : YP_007242302.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : - COG ID : - EC number : - Position : 4379434 - 4380948 bp Length : 1515 bp Strand : - Note : PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E DNA sequence : ATGCCCGAACTCGATGTAAACGAAGTCACCACGCTGCTCGAACAGTCGGCCCAGCGCCGTCTGCCGTTCGCCTTTGCCCG CCGCCACGGCGTGATCCTGCTGGAGCGCGGCAGTGAGCTGCGTCTGGGCCTGCGCGAAGGTGCCGCGCTGACTGCGGTGC AGGAGGCGCAGCGGGTGGTCGGTATGCGCTTGCCGATGCAATGGCTGCCGCAGGCGGATTTCGAGCAGGCGCTTGGCGCG GCCTATCAGCACGATTCCTCGGCGGCGATGCTGATGGTCGAGGGGCTGGGCAACGACCTCGACCTGGCCAGCCTGGCCGA CCAGATCCAGGAAACCGAGGACCTGCTGGAGCAGGAGGACGACGCGCCGATCATCCGCCTGATCAACGCCATTCTCGGCG AGGCGATCGCCGAGAACGCCTCGGATATCCATATCGAAACCTTCGAGAAGCGCCTGGTGATCCGCTTTCGCGTCGACGGC ATCCTCCGTGAAGTGGTGCAGCCCAAGCGCGAGCTGGCGGCGCTGCTGGTTTCGCGGATCAAGGTCATGGCCAAGCTGGA TATCGCCGAGAAGCGCATCCCGCAGGATGGGCGCATCTCGCTTAGGGTCGGCGGGCGTGAGGTCGACATCCGCGTTTCCA CCTTGCCTTCGGCCAATGGCGAGCGGGTGGTGTTGCGTCTGCTCGACAAGCAGGCCGGGCGCCTGACCCTGCGTCACCTG GGCATGAACGAGCAGGACCGCGACCACCTGGAACAGGCGGTGAAGAAGCCCCACGGCATCATTCTGGTCACCGGCCCTAC CGGCTCAGGCAAGACCACCACGCTATATGCCGCGCTGACCACGCTCAATGACCGCACGCGCAATATCCTCACCGTCGAGG ACCCCATCGAATACCACCTCGAAGGCATCGGCCAGACGCAGGTCAACACCAAGGTCGACATGACCTTCGCCCGCGGCCTG CGCGCCATCCTGCGCCAGGACCCCGACGTGGTGATGGTCGGCGAGATCCGCGATCAGGAAACCGCCGACATGGCCGTGCA GGCCTCGTTGACCGGCCACTTGGTGCTCTCCACGCTGCACACCAACAGCGCCATCGGCGCCGTCACGCGCCTGGTGGACA TGGGTGTCGAGCCGTTCCTGATTTCCTCCTCGCTGCTCGGTGTGCTGGCCCAGCGCCTCGTGCGGGTGCTGTGCAATGAC TGCAAACGTGCCTACGTCGCCGATGCCGCCGAGTGCGCGCTGCTCGGTGTGAGTCCGGACAACGCACCCACGCTGTATCA CGACGAAGGCTGCGAGCAGTGTCGCGGGCTCGGGTACCGCGGGCGTACCGGCATTTACGAACTGGTGCTGTTCGACGATG CCCTGCGCACCATGGTACACACCCGCGCCAGCGAGCAGGACATGCTGCGCCACGCGCGGGTGCTGGGGCCGAGCATCCGC GACGACGGCCTGCGCAAGGTGCGCGAAGGCGTGACCACCATCGAGGAAGTGCTGCGGGTGACGCGTGAGGAGTGA Protein sequence : MPELDVNEVTTLLEQSAQRRLPFAFARRHGVILLERGSELRLGLREGAALTAVQEAQRVVGMRLPMQWLPQADFEQALGA AYQHDSSAAMLMVEGLGNDLDLASLADQIQETEDLLEQEDDAPIIRLINAILGEAIAENASDIHIETFEKRLVIRFRVDG ILREVVQPKRELAALLVSRIKVMAKLDIAEKRIPQDGRISLRVGGREVDIRVSTLPSANGERVVLRLLDKQAGRLTLRHL GMNEQDRDHLEQAVKKPHGIILVTGPTGSGKTTTLYAALTTLNDRTRNILTVEDPIEYHLEGIGQTQVNTKVDMTFARGL RAILRQDPDVVMVGEIRDQETADMAVQASLTGHLVLSTLHTNSAIGAVTRLVDMGVEPFLISSSLLGVLAQRLVRVLCND CKRAYVADAAECALLGVSPDNAPTLYHDEGCEQCRGLGYRGRTGIYELVLFDDALRTMVHTRASEQDMLRHARVLGPSIR DDGLRKVREGVTTIEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-126 | 62 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-126 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psest_4202 | YP_007242302.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 1e-164 | 78 |
| Psest_4202 | YP_007242302.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 1e-125 | 61 |
| Psest_4202 | YP_007242302.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 1e-120 | 57 |
| Psest_4202 | YP_007242302.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 2e-74 | 48 |
