|
Name : Psest_4048 (Psest_4048) Accession : YP_007242148.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Unknown Product : type I restriction-modification system methyltransferase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 4221673 - 4223388 bp Length : 1716 bp Strand : - Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain DNA sequence : ATGAACCCCATCGAACAACAATTTTTTACCGAGCTTGAAAAGAAGCTCTGGACGGCCGCTGACAAGCTGCGTTCTGCGCT GGATGCATCGGTTTACAAGCATGTGGTGCTCGGTCTGATCTTTCTCAAGTATGTCTCCGATGCCTTCGAGGAACGCCAGC GCGAGCTGCGCGCGCAACTCACCAATCCCGCTGACGATTACTTTATGGACCCCGAGGATTATGGCGACCTCGGCAGCGAA GAGTACGAAGAAAATATCGCCGCCGAGCTAGAAGTACGCGACTACTACACTGAGAAAAACGTCTTCTGGGTGCCGATGGA AGCACGCTGGCAAACCCTGCGAGAGTTAGCGCAGCTGCCGCCCGGAGAGCCTTTGCCCTGGAACGCGCCGGGTAAAGACA CGGCAGAAAAGATGCGTACCGTCGGCTGGCTGATCGACAATGCCATGGAGGCCATTGAGCGCGAGAACGTCAAACTCAAG AACGTGCTTAACAAGGAGTTTTCCCGCACCCAGCTCGACAGCCACAAGTTGGCTGATCTGATCGCCCACTTCTCTGACAC CAACTTTAGCCAGCCTAGCTATAACGGTCAGCCGCTGAATCTAAAGAGCAAAGACATCCTCGGCCACGTCTACGAATACT TCCTCGGCCAGTTCGCACTGGCGGAGGGCAAAAAGGGCGGCCAGTACTACACGCCCAAAAGCATCGTCACGCTGATCGTC GAGATGCTGCAGCCCTTCAAGGGCCGCGTGTACGACCCCGCCATGGGTTCGGGTGGTTTCTTCGTGCAAAGCGAGGAATT TATCGCCGAGCACGGCGGCAAGGTGGTCAACGGTAAAACCGGCCAGATCAGCGTCTATGGCCAGGAAAGCAACCCCACCA CCTGGAAACTGGCGGCCATGAACATGGCCATTCGTGGCCTTGACTTCAACTTTGGTGGCCAACCCGGCGACACCCTGCAA AACGACCTGCACCCCGATCTGCGCGCCGACTACGTGATGGCCAACCCGCCCTTCAATATGAAGGAGTGGTGGAACGCCAA GTTGGAACAAGACCCCCGCTGGCTGGTGGGCACGCCCCCGCAGGGCAACGCCAACTTCGCCTGGCTGCAGCATATGCTCT ACCACCTGGCCCCCACTGGCAGTATGGCGCTGCTGCTGGCCAATGGTTCGATGAGCAGCAACACCAACAACGAAGGCGAA ATCCGCAAGCAACTGATCGAGCAAGACTATGTGGAATGCATGGTGGCACTGCCCGGTCAGCTCTTTACCAACACGCAGAT TCCGGCTTGCATCTGGTTCCTGACCAAAGATAAGGCCAACGGCTTCAACCTCGACAAGAAGAAGCGCGACCGCCGCGGCC AGTTCCTCTTCATCGACGCCCGCCAGCTCGGCTATATGAAAGACCGCGTACTGCGCGACTTCACCCTGAACGATATCAAG AAGGTGGCCGACACCTTCCATGCCTGGCAGCACGATGAGGGCTATGAAGACGTTGCGGGCTTCTGTTGTTCGACCTCGCT GAATGAAATCCGCAAGCACGAGCACGTGCTAACGCCGGGGCGCTATGTAGGTGCGAAGGAGCAGGAGGATGACGGCGAAG TCTTTGCGGACAAGATGACGCGGTTGACAGCGCAATTGGCGGAGCAGTTCGAGGAAAGCGCCAAACTGGAGGGGGAAATC AGGAAGAATTTGGCGGGGTTGGGATATGGCATCTGA Protein sequence : MNPIEQQFFTELEKKLWTAADKLRSALDASVYKHVVLGLIFLKYVSDAFEERQRELRAQLTNPADDYFMDPEDYGDLGSE EYEENIAAELEVRDYYTEKNVFWVPMEARWQTLRELAQLPPGEPLPWNAPGKDTAEKMRTVGWLIDNAMEAIERENVKLK NVLNKEFSRTQLDSHKLADLIAHFSDTNFSQPSYNGQPLNLKSKDILGHVYEYFLGQFALAEGKKGGQYYTPKSIVTLIV EMLQPFKGRVYDPAMGSGGFFVQSEEFIAEHGGKVVNGKTGQISVYGQESNPTTWKLAAMNMAIRGLDFNFGGQPGDTLQ NDLHPDLRADYVMANPPFNMKEWWNAKLEQDPRWLVGTPPQGNANFAWLQHMLYHLAPTGSMALLLANGSMSSNTNNEGE IRKQLIEQDYVECMVALPGQLFTNTQIPACIWFLTKDKANGFNLDKKKRDRRGQFLFIDARQLGYMKDRVLRDFTLNDIK KVADTFHAWQHDEGYEDVAGFCCSTSLNEIRKHEHVLTPGRYVGAKEQEDDGEVFADKMTRLTAQLAEQFEESAKLEGEI RKNLAGLGYGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 0.0 | 68 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 8e-129 | 49 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-129 | 49 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-129 | 49 |
