Name : Psest_4016 (Psest_4016) Accession : YP_007242119.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : - COG ID : - EC number : - Position : 4193062 - 4194237 bp Length : 1176 bp Strand : + Note : PFAM: Phage integrase family DNA sequence : ATGCCTCTGACGGCCTTGCAGGTGAAGAGCGCCGCACCACGCAAAAGTGACTACGGCCTTGCTGATGGAGGCGGTTTATT CCTCTGGATTCGCGCAGCAGGCGGCAAGTCTTGGCGCTTCCGATTCCGCCTGGATGGCAAGCAGTCTCATATTTCCCTTG GCACCATCGACAAGGTAACGCTCGCGCAGGCTCGACAGCTGGCATCGGATGCACGCCAGCTTGTGGCGCAGGGCCGGCAC CCCGGGCTTGAGCGCAAGGTAATGCGAGCTCAGGCGGCAATGTCTCGCGCCAATACCTTCAAAAGCCTTGCGCTGGAGTG GCATCAGCATAAGGCTCCACGCTGGTCGGTCGGGTACGCCGGCGACGTAGTGGAAGCCTTCGAGCTGGATGTTTTCCCTC AAGTGGGAAGCCTGCCGCTAACTGACATCAAGCCAATGCAGTGGCTGCAGGTATTCCGCCGCATTGAATCACGAGGCGCT CTGGAGAAGCTGCGCAAGGTTCGACAGCGCTGCCAGGAGGTGTACCGTTTCGCAATTGCTACCGGTCGCGCCGAGTACAA CCCTATTGCCGACATTGGCGGAGCACTGCAGACGCCTACCTCACGGCATTACCCTTTCTTGCCCATTGCTGAAATCCCGG CACTGATACGCAGCATTCAGGCATGTCCGGGACATGACGTCGTGAAGATCGCCACTCGCCTTCTGATTCTGACCGGAGTG CGTACAGCTGAATTGCGTGGAGTCCCCTGGTCGGAGTTTGACCTCGACAAAGCGCTCTGGCTGATTCCGGCTGCGCGCAT GAAGATGCGCCGCGCCCACCTTGTTCCACTCTCCCAGCAGGCTGTGGCTGTACTGCGCGAACTGGAACGCATTACTGGTG GCTACACGCTCGCATTCCCCGGCCGTAACGACCCGGCAAAGCCCATGAGCGAAGCCGCCATCAACCAACTGCTGAAGCGC TCCGGTTACGACGGACGCGCCACTGGCCATGGATTCCGCCACACGATGTCCACCACCCTGCACGAACAGGGGTACCCCAG CGAGTGGGTCGAAACCCAGTTGGCGCATGTGGACAAGAACAGCATTCGCGGCACCTACAACCATGCCCAGTATTTGGAGG GGCGGCGAGAGATGCTTCAGTGGTATGCCAACCATGTGGATGAACTACATGACTAA Protein sequence : MPLTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVTLAQARQLASDARQLVAQGRH PGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYAGDVVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGA LEKLRKVRQRCQEVYRFAIATGRAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGV RTAELRGVPWSEFDLDKALWLIPAARMKMRRAHLVPLSQQAVAVLRELERITGGYTLAFPGRNDPAKPMSEAAINQLLKR SGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKNSIRGTYNHAQYLEGRREMLQWYANHVDELHD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 8e-109 | 54 |
int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 5e-108 | 53 |
int | ACU09430.1 | integrase | Not tested | LEE | Protein | 5e-108 | 53 |
intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 7e-108 | 53 |
ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 7e-108 | 53 |
unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 1e-108 | 53 |
int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-108 | 53 |
aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-108 | 53 |
int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-107 | 53 |
S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-106 | 53 |
SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-106 | 53 |
int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 8e-107 | 53 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Psest_4016 | YP_007242119.1 | integrase | VFG0783 | Protein | 3e-108 | 53 |
Psest_4016 | YP_007242119.1 | integrase | VFG0598 | Protein | 5e-107 | 53 |