Gene Information

Name : Psest_3937 (Psest_3937)
Accession : YP_007242041.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : ATP-dependent carboxylate-amine ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4109418 - 4110761 bp
Length : 1344 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit

DNA sequence :
ATGTCCATGACGCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGTGCCGTGGC
TATCGCTCTGCGCAACCGCTGGCGGCGCATGCAGCTGCCGGCTGAACTGCGCCAGGAAGTCACCCCGAAGAACATCCTGA
TGATCGGCCCGACCGGTGTCGGCAAGACCGAAATCGCCCGCCGCCTGGCCAAGCTGGCCAATGCGCCCTTCCTGAAAGTG
GAAGCGACCAAGTTCACCGAGGTCGGCTATGTCGGCCGTGACGTCGAATCGATCATTCGCGACTTGGCCGACGCCGCGCT
GAAGATGCTGCGCGAGCAGGAGGTGCACAAGATGCGCCACCGCGCCGAAGACGCCGCCGAAGAGCGCATTCTCGATGCGC
TGCTGCCGCCAGCGCGCCCGGTGGGCTTCTCCGAGGAGCCAATGCAGGCGAGCGATTCCAACACCCGCCAGCTGTTCCGC
AAGCGCCTGCGCGAGGGGCAGCTGGACGACAAGGAAATCGACATCGAAGTGGCCGAAAGCCCGGCCGGCGTGGAGATCAT
GGCCCCACCCGGCATGGAGGAGATGACCAACCAGCTGCAGAACCTCTTCGCCAACATGGGCAAGGGCAAGAAGAAGAGCC
GCAAGCTGAAGATCAAGGAAGCCTTCAAGCTGATCCGCGACGAGGAGGCCGCGCGCCTGGTCAATGAAGAAGACCTCAAG
GCCCGCGCCCTGGAAGCGGTTGAGCAGAACGGTATCGTCTTCATCGACGAGATCGACAAGGTGGCCAAGCGCGGCAATAC
CAGCGGCGCCGACGTCTCCCGCGAGGGCGTGCAGCGCGACCTGCTGCCGCTGATCGAAGGCAGCACGGTCAACACCAAGC
TGGGCATGGTCAAGACCGACCACATCCTCTTCATCGCCTCCGGCGCTTTCCACCTGTCCAAGCCCAGCGACCTGGTGCCG
GAACTGCAGGGTCGCCTGCCGATCCGCGTCGAGCTCAAGGCGCTGTCACCGCAGGACTTCGAGCGCATCCTCACCGAGCC
GCATGCGGCGCTCACCGAGCAATACCGTGAACTGCTGAAAACCGAGGGCCTGCACATCGAGTTTCTCGAAGACGGCATCA
AGCGCATCGCCGAGATCGCCTGGCAGGTCAACGAGAAGACCGAGAACATCGGCGCGCGTCGCCTGCACACGCTGCTCGAG
CGGCTGCTGGAAGAGGTTTCCTTCAGTGCTGGCGATATCGCAGCCAAGCAGGACGGCGAAGCGATCCGCATCGACGCTGC
CTACGTCAACGAGCACCTCGGCGAACTGGCGCAGGACGAAGACCTGTCGCGCTACATTCTCTAA

Protein sequence :
MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFLKV
EATKFTEVGYVGRDVESIIRDLADAALKMLREQEVHKMRHRAEDAAEERILDALLPPARPVGFSEEPMQASDSNTRQLFR
KRLREGQLDDKEIDIEVAESPAGVEIMAPPGMEEMTNQLQNLFANMGKGKKKSRKLKIKEAFKLIRDEEAARLVNEEDLK
ARALEAVEQNGIVFIDEIDKVAKRGNTSGADVSREGVQRDLLPLIEGSTVNTKLGMVKTDHILFIASGAFHLSKPSDLVP
ELQGRLPIRVELKALSPQDFERILTEPHAALTEQYRELLKTEGLHIEFLEDGIKRIAEIAWQVNEKTENIGARRLHTLLE
RLLEEVSFSAGDIAAKQDGEAIRIDAAYVNEHLGELAQDEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 2e-90 48